Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq14 113 1e-19 >seq14 Length=1191321 Score = 113 bits (124), Expect = 1e-19 Identities = 318/476 (67%), Gaps = 18/476 (4%) Strand=Plus/Plus Query 243287 CATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTT 243346 |||| || | || |||||||||| | |||||| ||||| || | ||| | | ||| Sbjct 900700 CATTCGCCAACCGCCTCGTCGCCTTCGCTGCCGTTGAGGGTAT-CT-TCTTCAGTG-GTT 900756 Query 243347 TCTGCGC---CATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 243403 || ||| |||||| |||||| || ||| | ||||| || ||| | || | Sbjct 900757 CCTTCGCGTCCATCTTCTGGCTGAAAAAGCGTGGTCTCATGCCCGGTCTCACATTCTCCA 900816 Query 243404 ACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAG-TTCGGTGAGCTTAT-GTATTC 243461 ||||| ||||| ||| || |||||| | ||| |||| || | |||| | || ||| Sbjct 900817 ACGAGCTCATCTCTCGTGATGAGGGCATGCAC--ACAGATTTTGCCTGCTTGTTGTTTTC 900874 Query 243462 AAAGCTCCAGAACAAGCTACCATTC---GAAACGGTCAAACAAATCATCACAGAAGCAGT 243518 |||| ||||| | || | || | ||| | |||||||| || || || Sbjct 900875 T---CTCCTCAACAACCGTCCCAGCAAGGAGGCTGTCGAGGCTATCATCACCGAGGCTGT 900931 Query 243519 TGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTC 243578 || ||| |||| ||| | | |||||| |||| || || | ||||||||| | Sbjct 900932 CACAATCGAGCAGGAGTTCCTGTCAGACGCTCTTCCCTGTGCTCTGCTCGGCATGAACGC 900991 Query 243579 TGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTA 243638 ||||||| | ||||||||||| ||||| || ||||| | || | || ||||| | Sbjct 900992 CACACTCATGTGTCAGTACATCGAGTTCGTTGCTGACCGTCTGCTCTTGGCCCTTGGCAA 901051 Query 243639 TGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGG 243698 || |||||| | | |||||||| | || |||||| ||||||||| || Sbjct 901052 CCCCAAGTACTACAACGCTACCAACCCCTTCGATTTCATGGAGAACATTTCGCTCGCCGG 901111 Query 243699 GAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753 || || || |||||||| ||||||||| |||| || || | | || ||||| ||| Sbjct 901112 CAAGACCAATTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTCATG 901166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876919518300