Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq9 241 2e-58 seq14 87.8 2e-12 >seq9 Length=1465676 Score = 241 bits (266), Expect = 2e-58 Identities = 1132/1774 (64%), Gaps = 53/1774 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||||||| | ||| | | |||||||||||||| || |||||||| | Sbjct 1038166 TGAACTGAATGGGTGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTGAGAC 1038107 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | |||||||| || | ||||| || | | |||| | || || | |||| Sbjct 1038106 CGAGCTTCCAGCCAGCGAAGTGCATGGATGTGATCTTGCCCATAGTAGGCTCCTTCATGT 1038047 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || ||||| || || |||||||||||| ||||| || || ||||| | || | Sbjct 1038046 GGATGTTCAGGGACTGAGACTGATCGATGAAGGCACCACGGTCAGCGGCCATCTGGATGA 1037987 Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804 | | ||| ||||| || || |||| || |||| || || || ||||| | Sbjct 1037986 TGGTACGCTGCGAGATCTCCCAGACGGTCTTGTACAGAGTCTTGATCTCGTCAGGGATGT 1037927 Query 113805 CCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 113864 ||| || ||||| |||||| | || ||| | | |||||| | || | || Sbjct 1037926 TGGGGATGCGCTGAATGGAACCACCCTCAGCGATGATGCGGTTCTTCATGTTCTCGGTCC 1037867 Query 113865 AGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAACTCA 113920 ||||||| || | || |||| | || || | |||||||| |||||| Sbjct 1037866 AGAGACCCATGTCGACCAGGTCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTCA 1037811 Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 || || || ||| | ||| ||||| || | ||||| ||||| |||||||| ||||| Sbjct 1037810 CCAGCAAGCACGCGGC-GAGAGTAGATGTTCGATGTGTAGGGCTCGAAGCACTCGTTGTT 1037752 Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039 || | || |||| ||||||||| || |||||||| || | ||| || ||| |||| Sbjct 1037751 GCCGAGAATCTGGGAGGTGGAGGCAGTAGGCATGGGCGCGACGAGTAGCGAGTTGCGGAC 1037692 Query 114040 ACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTC------GTAGTTGAGCTTTGT 114093 ||| | | ||| |||| || || |||||||| | | || || ||| Sbjct 1037691 ACCGTGCTGAGCAATCTTCGCCTTCAGCGCCTCCCAGTCCCAAAGATCGGTGGGC-TTGA 1037633 Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153 | || ||||| ||| |||| || ||| | |||| ||||| |||||| |||| Sbjct 1037632 CGCC-----CCACAGGTCATACTGAAGCTCACCCTTGGAGATGGGCGAGCCCTCATATGT 1037578 Query 114154 CTCGTATGGGCCCTCAACCTCC---GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 114210 |||||| |||| ||| |||| || | ||| || | | || ||||| || Sbjct 1037577 CTCGTAGGGGC---CAAGCTCCTTAGCAATGTCGCAGGAGGAGGTCAAAGCGGCGTGGTA 1037521 Query 114211 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270 || || || || || || | ||||||| || || || || | || || Sbjct 1037520 GATGGTTTCGAAGATCTTGATGTTGAGCTCCTTGGCTTCAGGAGACTCGAAAGGCAGGCG 1037461 Query 114271 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330 | || || |||| || ||||| ||||||||||| ||||| || | || | | Sbjct 1037460 GAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCGAGACCAATGGGTCTGTGACGGAA 1037401 Query 114331 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390 || || || ||| ||||| || || ||||| | | | || || || Sbjct 1037400 GTTGCTGCGGCGTGCCTCCTCGACGGGGTAGTGGTTGACCTCGATGATCTTGTTGAGGTT 1037341 Query 114391 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 114450 ||| |||| || || |||||||| | | | || |||| || | ||| Sbjct 1037340 ACGTGTGCAGACCTGAACGACATCGTGAAGCTTCTGGAAGTC-GAACT-CGCCGCGCTTG 1037283 Query 114451 ATTGACATACTTAGGA----AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 114506 | | || || |||| || || | || ||||| || || |||| | |||||| Sbjct 1037282 A-AGTCA-ACGAAGGAGGGGAGAGCAACAGAGGCCAGGTTGCAGACAGCGACCTCATCGG 1037225 Query 114507 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 114566 | |||||||||| || ||||| || |||| || || || ||||| || | ||||| Sbjct 1037224 GAGCAGTGTACTCGATGATTTCAGTGCACAGGTTGGAGCTGCGGATGGTACCAAGGTTCT 1037165 Query 114567 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 114626 | || || ||| |||| ||||||||||| |||||| | || | || ||||| | Sbjct 1037164 TCTGGTTGCTCTTCCTGTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGG 1037105 Query 114627 TTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC 114685 | || | || |||||| || | ||||| | || | || | ||||| | | Sbjct 1037104 TCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTG-AGCACGGACAGTCTCACGACCCTTG 1037046 Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 ||| | | ||||||||| ||| ||||| | ||||| ||||| | | || | ||| Sbjct 1037045 CCCGCTTTCTCGTACTTCTCGTACAGGGCGACGAACTCGTCACCGTAGACGTCAGCGAGG 1036986 Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 || || || | ||||| | ||| | ||| | || || || ||||||| |||| Sbjct 1036985 CCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTTCTGCTGGACACGCTCCATG 1036926 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 ||||| || |||||||| ||||| |||||||||| || |||| | || || | || Sbjct 1036925 AAGAGATCGGGGATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTGCCG 1036866 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || | | || | ||| | | || || |||||||| || || ||||| | Sbjct 1036865 TGGTTCTTCCTGAGGTCGAGGAAGCCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATG 1036806 Query 114926 GCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979 |||| | || | ||| | | ||| |||||| || || | || ||| || Sbjct 1036805 GCGAAGGCACCGGGGCGCTT--GTTG-CCACCCTGGTCGACGTAGCGGGCAGTGTTGTTG 1036749 Query 114980 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG-TCCCCCGA-ATACGAG 115037 | || || ||||| || |||| ||| | ||| || || | ||| |||| || ||| Sbjct 1036748 TAGACACGGAGCATGGGGATGAGACCGTTCGATGTTCCGTTGGTTCCTCCGATGTAGGAG 1036689 Query 115038 ACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 115097 | | |||| | | |||| || | ||||| || || || ||| ||||| Sbjct 1036688 CC--AGTGGCACGAATGCGGTGGACGTTGAGGCCAATTCCGCCAGCAGTCTTGGAGATCA 1036631 Query 115098 GCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAA 115157 |||||| | |||| || ||||||| || ||||| ||| |||| | |||| | Sbjct 1036630 ACGCGCAGGTCTTGAGTGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATGA 1036571 Query 115158 GGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGT 115217 |||||||| |||||| || ||| ||||| || ||||||||||| || || | |||| Sbjct 1036570 GGAAGCAGGACGACATCTGCGGCGAGGGTGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGT 1036511 Query 115218 GGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCC 115276 | |||| ||| | || ||||| | ||||| ||||| | | | ||||| ||| Sbjct 1036510 GTGTGAA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCGATGTCCTCC 1036452 Query 115277 CCGTGAATACCGATCGAGACCCGCATAAACATGT 115310 ||| || |||| | || ||||| | ||||| Sbjct 1036451 ATGTGGATGCCGACGGCAACACGCATGAGCATGT 1036418 >seq14 Length=1191321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 288/443 (65%), Gaps = 10/443 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || |||||||||||||| || ||||| ||| | | || |||||||| Sbjct 901148 GTAGTCACCGACACGCTTCTCGAAGAAATTGGTCTTGCCGGCGAGCGAAATGTTCTCCAT 901089 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 ||||| || ||||| | | ||| | | ||| || |||| ||| ||| Sbjct 901088 GAAATCGAAGGGGTTGGTAGCGTTGTAGTACTTG--GGGTTGCCAAGGGCCAAGAGCAGA 901031 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | ||| |||| ||||||| | |||| | |||||| |||| || | Sbjct 901030 CGGTCAGCAACGAACTCGATGTACTGACACATGAGTGTGGCGTTCATGCCGAGCAGAGCA 900971 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || ||||| | | |||| ||| ||| ||| || || || | ||| || Sbjct 900970 CAGGGAAGAGCGTCTGACAGGAACTCCTGCTCGATTGTGACAGCCTCGGTGATGATAGCC 900911 Query 125996 TGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052 | | | ||| | || | | ||| | | || || | || |||||| Sbjct 900910 TCGACAGCCTCCTTGCTGGGACGGTTGTTGAGGAGAGAAAACAACAAG--CA-GGCAAAA 900854 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 ||| ||| | ||||| ||||| |||||||| || || ||||| || || |||||| Sbjct 900853 TCTGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAATGTGAGACCGGGCATG 900794 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 ||||| ||||| |||| |||||| || | || ||||| ||||||||| ||||| Sbjct 900793 AGACCACGCTTTTTCAGCCAGAAGATGGACGCGAAGGAACCACTGAAGAAGATACCCTCA 900734 Query 126173 ACACACGCGAACGCAAAGAGACG 126195 || ||||| || | ||| || Sbjct 900733 ACGGCAGCGAAGGCGACGAGGCG 900711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351972211440