Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 1e-11 >seq18 Length=1111935 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 671645 GGTCTTGGACCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAAT 671704 ||||| ||||| || || |||||||| | ||||| |||||||||||| ||||| || Sbjct 317363 GGTCTGACACCTTCGGAGTTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTCTTATTGAT 317304 Query 671705 ACGGCTATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAA 671764 || ||| | || |||||||| || |||||||| || | || || || ||||||| Sbjct 317303 ACAGCTGTCAAGACTGCTGAGACAGGTTATATCCAGCGTCGTCTCGTCAAGGCGCTCGAA 317244 Query 671765 GATATCA--AACAAGAATATGATGGTACAGT 671793 ||| ||| |||| || |||||||| || Sbjct 317243 GATGTCATGGTCAAG--TACGATGGTACTGT 317215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780811582121908