Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq9 232 8e-56 >seq9 Length=1465676 Score = 232 bits (256), Expect = 8e-56 Identities = 1101/1728 (64%), Gaps = 25/1728 (1%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| ||||||||||| || | ||||| | | ||||| || | | Sbjct 1038134 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGGATGTG 1038075 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | |||| ||| || || | |||| | |||| ||| ||| || |||||| Sbjct 1038074 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGGGACTGAGACTGATCGATGAAG 1038015 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGG 105769 |||||| | || ||||| | |||| | | ||| ||||| || || | Sbjct 1038014 GCACCACGGTCAGCGGCCATCTGGATGATGGTACGCTGCGAGATCTCCCAGACGGTCTTG 1037955 Query 105770 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTG 105829 || ||| ||||||| || || ||||| | | ||| ||||| ||||| ||| | | Sbjct 1037954 TACAGAGTCTTGATCTCGTCAGGGATGTTGGGGATGCGCTGAATGGAACCACCCTCAGCG 1037895 Query 105830 ACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGA 105889 | ||| | | |||||| | || || ||| ||||| || | || || |||| | Sbjct 1037894 ATGATGCGGTTCTTCATGTTCTCGGTCCAGAGACCCATGTCGACCAGGTCCTTGAGCAAC 1037835 Query 105890 TGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGT 105948 |||||||| | ||||| || || || | | ||| |||||||||| || Sbjct 1037834 CAGGGGTTGACAACCTGGAACTCACCAGCAAGCACGCGGCG-AGAGTAGATGTTCGATGT 1037776 Query 105949 GTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGG 106008 |||||| || ||||| || || || || | || || | ||||||||| || ||||| || Sbjct 1037775 GTAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGGGAGGTGGAGGCAGTAGGCATGGG 1037716 Query 106009 TGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCA 106068 || | | || ||| || | ||| | | || |||| || | ||||| Sbjct 1037715 CGCGACGAGTAGCGAGTTGCGGACACCGTGCTGAGCAATCTTCGCCTTCAGCGCCTCCCA 1037656 Query 106069 GTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGAC 106126 ||| | || | | || || || |||||| ||| | |||||| | || | ||| Sbjct 1037655 GTCCCAAA-GATCGGTGGGCTTGACGC-CCCACAGGTCATACTGAAGCTCACCCTTGGAG 1037598 Query 106127 GTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCC 106186 |||| || |||||| ||||||| |||| || | | | ||| | || ||| | Sbjct 1037597 ATGGGCGAGCCCTCATATGTCTCGTAGGGGCCAAGCTCCTTAGCAATGTCGCAGGAGGAG 1037538 Query 106187 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCT 106246 || | ||||| || |||||||| ||||| || | ||||||||||||| Sbjct 1037537 GTCAAAGCGGCGTGGTAGATGGTTTCGAAGATCTTGATGTTGAGCTCCTTGGCTTCAGGA 1037478 Query 106247 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306 || || || | |||| || || |||| || ||||| || ||||| | |||| Sbjct 1037477 GACTCGAAAGGCAGGCGGAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCGAGACCA 1037418 Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 || |||||||| || | || || || ||| ||||| || || || Sbjct 1037417 ATGGGTCTGTGACGGAAGTTGCTGCGGCGTGCCTCCTCGACGGGGTAGTGGTTGACCTCG 1037358 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426 |||| ||| || || || | || || || ||||| || | | || Sbjct 1037357 ATGATCTTGTTGAGGTTACGTGTGCAGACCTGAACGACATCGTGAAGCTTCTGGAAGTCG 1037298 Query 106427 AAAGTGCGAGTCTCTTCA--TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAA 106484 || || | ||| | | || | || || || | || |||| ||||| | Sbjct 1037297 AACTCGCCG--CGCTTGAAGTCAACGAAGGAGGGGAGAGCAACAGAGGCCAGGTTGCAGA 1037240 Query 106485 CAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAA 106544 |||| |||||| | | |||||||| | ||||| || |||| |||||| || | Sbjct 1037239 CAGCGACCTCATCGGGAGCAGTGTACTCGATGATTTCAGTGCACAGGTTGGAGCTGCGGA 1037180 Query 106545 TCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGG 106604 | || || | ||||| ||||| ||||| ||||| |||||||||||||||||| ||| Sbjct 1037179 TGGTACCAAGGTTCTTCTGGTTGCTCTTCCTGTTGGCAGCATCCTTGTAGAGCATGAAGG 1037120 Query 106605 GCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACA 106663 | | || ||||| ||||| | || |||||| || | ||| | | || | | || ||| Sbjct 1037119 GGTTACCGGTCTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCACGG-ACA 1037061 Query 106664 ATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722 | | | ||| | ||| | ||||||||| ||| ||||| | ||||| ||||| Sbjct 1037060 GTCTCAC-GACCCTTGCCCGCTTTCTCGTACTTCTCGTACAGGGCGACGAACTCGTCACC 1037002 Query 106723 CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTC 106782 |||| | ||| || || || || || || | || | ||| | || || Sbjct 1037001 GTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTTCTG 1036942 Query 106783 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCG 106842 || || |||| |||||| || || || |||||||| | | |||||||| | || Sbjct 1036941 CTGGACACGCTCCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGATCGCGGGCGCG 1036882 Query 106843 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 106902 | |||| || | || ||||| | | || ||||| | | || || |||||||| Sbjct 1036881 AACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAAGCCGAAGACGTCAGCGTGCCA 1036822 Query 106903 TGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGC 106958 |||||| || |||| |||| | || | | | ||| | | || | || |||| Sbjct 1036821 TGGCTCGAGGTAGATGGCGAAGGCACCGGGGCGCTTGTTGCC-ACCCTGGTCGACGTAGC 1036763 Query 106959 GCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCC 107018 | || ||| ||| | || || ||||| || || | ||| | ||| || || || | Sbjct 1036762 GGGCAGTGTTGTTGTAGACACGGAGCATGGGGATGAGACCGTTCGATGTTCCGTTGGTTC 1036703 Query 107019 C-CCGAA-TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGC 107076 | |||| || ||| | |||| | | |||| || | ||||| || ||||| Sbjct 1036702 CTCCGATGTAGGAGCC--AGTGGCACGAATGCGGTGGACGTTGAGGCCAATTCCGCCAGC 1036645 Query 107077 CCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 107136 ||| ||||| ||| || | | || || | ||||| || | ||| |||||| Sbjct 1036644 AGTCTTGGAGATCAACGCGCAGGTCTTGAGTGTGTCGTAGATGCCCTCGATGCTGTCCTC 1036585 Query 107137 CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 107196 ||| || |||| |||||||| ||||||||||| ||||| || || |||||||| Sbjct 1036584 CTTCATGTCGATGAGGAAGCAGGACGACATCTGCGGCGAGGGTGTGCCGGCGTTGAAGAG 1036525 Query 107197 GGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAG 107255 || || | ||||| |||| ||| | || ||||| | |||||||||||| | | | Sbjct 1036524 CGTCGGCGAGGCGTGTGTGAAG-TACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCT 1036466 Query 107256 AATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || ||||| ||| ||||||||||| ||| |||||||| | ||||| Sbjct 1036465 TCTCGATGTCCTCCATGTGGATGCCGACGGCAACACGCATGAGCATGT 1036418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979192302320