Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq17 158 1e-33 >seq17 Length=1134567 Score = 158 bits (174), Expect = 1e-33 Identities = 240/340 (71%), Gaps = 4/340 (1%) Strand=Plus/Minus Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 || ||||| |||| | |||||| | || ||| | ||| |||| |||| ||| | | Sbjct 752623 GGATTCCATGCGCTAAGGATGATTCTCCGGTCGTAAGGGCGGTTCTTGATCTTGTCAATG 752564 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165 | | | ||||| || || ||| ||||| ||||||| | | || |||||||| Sbjct 752563 ACCTCTGCGAGCTGGTCGACACCCTGCCCCGTGTAGTCTACAGAGTGGCCCTTGTACTCT 752504 Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225 |||||||| |||| ||||||||| |||||||| || || ||||| ||||| || |||| Sbjct 752503 GCTCCGAAGTGCCGCCACTGGAAGCCGTACACAGGCCCAAGGTCCCCCTCCTCGTGGTGC 752444 Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCC 30283 ||||| | |||||| | | | ||||||||| ||||||||||||| | || Sbjct 752443 GTCAAGCCAACGCTATCCAAATATGCGCGCGAACCGTTGCCGTCCCAGATCTTGATGCCG 752384 Query 30284 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343 ||||| | |||| ||| | | ||||||||| | |||||| |||||||| ||| Sbjct 752383 GCTTCTTG--GAGCGACTTGTAATGTGTGGACCCCGCAATGAACCATAGCAGCTCTCCCA 752326 Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||||| | || || | |||||| || |||||||| Sbjct 752325 CGACGGCTCGCAGGAAAACGCGCTTGGTTGTAAGGAGGGG 752286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616514354114