Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq9 430 2e-115 >seq9 Length=1465676 Score = 430 bits (476), Expect = 2e-115 Identities = 1292/1967 (66%), Gaps = 72/1967 (4%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || ||| ||||||| |||| || || ||||||||||||||||| Sbjct 1038170 ACAGTGAACTGAATGGGTGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTG 1038111 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| |||||| | |||||| | ||||| |||| | || || | Sbjct 1038110 AGACCGAGCTT---CCAGCCAGCGAAGTGCATGGATGTGA---TCTTGCCCATAGTAGGC 1038057 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 | | || || || | ||||||||||||| ||| || ||||| | | Sbjct 1038056 TCCT-----TCATG-------TGGATGTTCAGGGACTGAGACTGATCGATGAAGGCACCA 1038009 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | |||||||||||| | ||||| | ||| |||| |||||| ||||||||| | | Sbjct 1038008 CGGTCAGCGGCCATCTGGATGATGGTACGCTGCGAGATCTCCCAGACGGTCTTGTACAGA 1037949 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGT-ATGGTC 212846 |||| || || |||| | ||||||| ||| | || || ||| | ||| | Sbjct 1037948 GTCTTGATCTCGTCAGGGATGTTGGGGATGCGCTGAATGGAACCACCCTCAGCGATGATG 1037889 Query 212847 AGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGA 212906 | | | ||||| |||| ||||||| ||| || ||||| ||||| || Sbjct 1037888 CGGTTCTT---CATGTTCTCGGTCCAGAGACCCATGTCGACCAGGTCCTTGAGCAACCAG 1037832 Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| ||||| | ||||| | | ||| | ||| || |||||| Sbjct 1037831 GGGTTGACAACCTGGAACTCACCAGCAAGCACGCGGCGAGAGTAGATGTTCGATGTGTAG 1037772 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || ||||||||| || |||||||| | ||| ||| || |||||||| || Sbjct 1037771 GGCTCGAAGCACTCGTTGTTGCCGAGAATCTGGGAGGTGGAGGCAGTAGGCATGGGCGCG 1037712 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGA-AGCTCTGCCCAGTC 213085 || || || ||| | || ||||||| | || |||| ||| | ||||||| Sbjct 1037711 ACGAGTAGCGAGTTGCGGACACCGTGCTGAGCAATCTT-CGCCTTCAGCGCCTCCCAGTC 1037653 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG-CCTT 213144 ||| ||| ||| | ||| ||| ||||| |||| |||| ||| | || | Sbjct 1037652 CCAA-----AGATCGGT----GGGCTTGACGCCCCACAGGTCATACTG-AAGCTCACCCT 1037603 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 || | ||| ||||| || | |||||||||| ||||||| || | ||||||| Sbjct 1037602 TGGAGATGGGCGAGCCCTCATATGTCTCGTAGGGGCCAAGCTCCTTAGCAATGTCGCAGG 1037543 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | | || || |||| |||||||||||| || |||| ||||||||| |||||| | Sbjct 1037542 AGGAGGTCAAAGCGGCGTGGTAGATGGTTTCGAAGATCTTGATGTTGAGCTCCTTGGCTT 1037483 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | || ||| ||| |||| | |||| ||||||| || |||||||| |||| Sbjct 1037482 CAGGAGACTCGAAAGGCAGGCGGAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCGA 1037423 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || ||||||||||| | | ||| | | || |||||| | |||||| |||| Sbjct 1037422 GACCAATGGGTCTGTGACGGAAGTTGCTGCGGCGTGC-CTCCTCGACGGGGTAGTGGTTG 1037364 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||||||||||||||| || ||| || | ||||| | || | || | Sbjct 1037363 ACCTCGATGATCTTGTTGAGGTTACGTGTGCAGACCTGAACGACATCGTGAAGCTTCTGG 1037304 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 | |||| || || | | | || || || || || | |||||||||| Sbjct 1037303 AAGTCGAACTCGCCGCGCTTGAAGTCAACGAAGGAGGGGAGAGCAACAGAGGCCAGGTTG 1037244 Query 213504 CAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562 || || || ||||| | | ||| | |||||||| ||||| || |||||||||||| || Sbjct 1037243 CAGACAGCGACCTCATCGGGAG-CAGTGTACTCGATGATTTCAGTGCACAGGTTGGAGCT 1037185 Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622 |||||||| || ||||||| ||||| ||| |||||||| ||||||||||||||| Sbjct 1037184 GCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTCCTGTTGGCAGCATCCTTGTAGAGCAT 1037125 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTT 213682 | ||||| |||||||| ||| | | | || || | |||||| | | || Sbjct 1037124 GAAGGGGTTACCGGTCTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCACG 1037065 Query 213683 GACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTC 213742 ||| | | | ||| | | || | |||||||| ||||| || || ||| || Sbjct 1037064 GAC-AGTCTCACGACCCTTGCCCGCTTT--CTCGTACTTCTCGTACAGGGCGACGAACTC 1037008 Query 213743 GTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCC 213802 || || |||| | || || || || ||| |||||||| |||| || || Sbjct 1037007 GTCACCGTAGACGTCAGCGAGGCCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCC 1036948 Query 213803 GTCATCT-CTG-ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCC 213860 || ||| ||| || | || |||||| || || |||| |||||| ||| ||| || || Sbjct 1036947 GT--TCTGCTGGACACGCTCCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGATCG 1036890 Query 213861 CTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCC 213920 | || | ||| ||| || ||| || | || || || ||| | |||| ||| Sbjct 1036889 CGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAAGCCGAAGACGTCA 1036830 Query 213921 GCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCC 213977 |||||||| ||||| | ||||||||| ||||| || || | |||| || |||||||| Sbjct 1036829 GCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCG 1036770 Query 213978 ACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCG 214037 || | ||| ||||| ||| || || | ||| | || ||||| || |||| Sbjct 1036769 ACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGGATGAGACCGTTCGATGTTCCG 1036710 Query 214038 TTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCA 214097 |||||||| | || || ||||| | ||| | | | | | | ||| || || || Sbjct 1036709 TTGGTTCCTCCGATGTAGGAGCCAGTGGCACGAATGCGGTGGACGTTGAGGCCAATTCCG 1036650 Query 214098 CCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTG 214157 || || ||||||||||| |||||| | | | || || |||||| | |||||| Sbjct 1036649 CCAGCAGTCTTGGAGATCAACGCGCAGGTCTTGAGTGTGTCGTAGATGCCCTCGATGCTG 1036590 Query 214158 TCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTG 214217 || || | | || | | ||||||| ||| | ||| ||| || | ||| | |||| Sbjct 1036589 TCCTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGCGGCGAGGGTGTGCCGGCGTTG 1036530 Query 214218 AAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGA-GGAGCCTGTAGGTCTCCAG 214276 || ||||| || ||| || | | |||| | || | | || | ||| ||||| | Sbjct 1036529 AAGAGCGTCGGCGAGGCGTGTGTGAAGTACTTCTGCGACATGTAGTC-GTATGTCTCGAT 1036471 Query 214277 GACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCA--CCTCATCAGCATGTGCTGG 214334 | | |||||| | | |||||| || || ||| | ||| ||||||||||| Sbjct 1036470 GGCCTTCTCGATGTCCTCCATGTGGA--TGCCGACGGCAACACGCATGAGCATGTGCTGC 1036413 Query 214335 GGCCTCTCTATGGGTCCTTTGGGGCCCTT------GAGCAGGTAGGAGCGCTCCAGAGTC 214388 || | ||| | | |||| ||| || ||||||||| |||||||| || ||| Sbjct 1036412 GGGCGCTC--GGCGACCTT----GCCGTTGATGCGGAGCAGGTATGAGCGCTCGAGCGTC 1036359 Query 214389 TTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCT 214448 ||||| || ||| | |||| | ||| ||| | || ||| || ||||| Sbjct 1036358 TTGAAGCCGAAGAACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCGCTGTTGAGCTCA 1036299 Query 214449 TCCGCGTGCTCTTGGCTCAGCTTGAAAATCTCGTCCGAGATCAAGGG 214495 || || || || ||| | | |||| | | ||||||||||| ||| Sbjct 1036298 TCGGCATGGTCCTGGATGATCTTGTAGACGCGGTCCGAGATCATGGG 1036252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530261573120