Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq9 242 4e-59 seq21 82.4 9e-11 >seq9 Length=1465676 Score = 242 bits (268), Expect = 4e-59 Identities = 1109/1740 (64%), Gaps = 33/1740 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || || ||||||||||| ||| ||||| || | Sbjct 1036410 CCCGCAGCACATGCTCATGCGTGTTGCCGTCGGCATCCACATGGAGGACATCGAGAAGGC 1036469 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | |||||||||||| | ||||| || | ||| |||| ||||| | || || |||| Sbjct 1036470 CATCGAGACATACGACTACATGTCGCAGAAGTA-CTTCACACACGCCTCGCCGACGCTCT 1036528 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || || ||||| ||||||||||| |||||||| |||| || ||||||| Sbjct 1036529 TCAACGCCGGCACACCCTCGCCGCAGATGTCGTCCTGCTTCCTCATCGACATGAAGGAGG 1036588 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || ||| | || ||||| | || || | | || ||| ||||| ||| |||| Sbjct 1036589 ACAGCATCGAGGGCATCTACGACACACTCAAGACCTGCGCGTTGATCTCCAAGACTGCTG 1036648 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCGG-GGGAC 75507 | || ||||| | || |||| | | |||| | ||| || |||| || || Sbjct 1036649 GCGGAATTGGCCTCAACGTCCACCGCATTCGTGCCACT--GGCTCCTACATCGGAGGAAC 1036706 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 || || ||| | ||| | || || ||||| || || | ||| ||| || ||||| Sbjct 1036707 CAACGGAACATCGAACGGTCTCATCCCCATGCTCCGTGTCTACAACAACACTGCCCGCTA 1036766 Query 75568 TGTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 || | | || | ||| ||| || || |||| ||||| | || ||||||| Sbjct 1036767 CGTCGA-CCAGGGTGGCAACAAGCGCCCCGGTGCCTTCGCCATCTACCTCGAGCCATGGC 1036825 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | || || || | | ||||| || | | ||||| || | || |||| ||| Sbjct 1036826 ACGCTGACGTCTTCGGCTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTTCGCG 1036885 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | |||||||| | | |||||||| || || || |||||| |||| || || || Sbjct 1036886 CCCGCGATCTCTTCTACGCTCTGTGGATCCCCGATCTCTTCATGGAGCGTGTCCAGCAGA 1036945 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 || | ||| | || | || || || || || || ||| | |||| |||| Sbjct 1036946 ACGGCGAGTGGACACTCATGTGCCCCAACGAGTGCCCTGGCCTCGCTGACGTCTACGGTG 1037005 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | ||||| | ||||| ||| ||||| || | | ||| | | || |||||| | Sbjct 1037006 ACGAGTTCGTCGCCCTGTACGAGAAGTACGAGAAAGCGGGCAAGGGTCGTGAGACTGT-C 1037064 Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 | | | || | | ||| | || |||||| | | ||||| ||||| || | || | Sbjct 1037065 CGTGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACCGAGACCGGTAACCCCTTC 1037124 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||| |||||||||||| |||| |||||| ||||| ||||| | || || ||| Sbjct 1037125 ATGCTCTACAAGGATGCTGCCAACAGGAAGAGCAACCAGAAGAACCTTGGTACCATCCGC 1037184 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 ||||| || || ||||| ||||| | |||||||| | | |||||| ||||| ||| Sbjct 1037185 AGCTCCAACCTGTGCACTGAAATCATCGAGTACACTGCTCCCGATGAGGTCGCTGTCTGC 1037244 Query 76043 AATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA--TGAAGAGACTCGCACTTTTGATT 76100 || |||| || | || || || | || | | ||| | || || || | Sbjct 1037245 AACCTGGCCTCTGTTGCTCTCCCCTCCTTCGTTGACTTCAAGCG--CGGCGAGTTCGACT 1037302 Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160 | || ||||| || || || | || || || ||| |||| || Sbjct 1037303 TCCAGAAGCTTCACGATGTCGTTCAGGTCTGCACACGTAACCTCAACAAGATCATCGAGG 1037362 Query 76161 GAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTT 76220 || || ||||| ||| || || || | || |||||||| |||||| Sbjct 1037363 TCAACCACTACCCCGTCGAGGAGGCACGCCGCAGCAACTTCCGTCACAGACCCATTGGTC 1037422 Query 76221 TGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATG 76280 | ||||| || ||||| || |||| || || |||| | || || || || Sbjct 1037423 TCGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTCCGCCTGCCTTTCGAGTCTCCTG 1037482 Query 76281 AAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGA 76340 ||||||||||| | || ||||| |||||||| || ||||| | || | Sbjct 1037483 AAGCCAAGGAGCTCAACATCAAGATCTTCGAAACCATCTACCACGCCGCTTTGACCTCCT 1037542 Query 76341 GTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 || || | ||| | | | || |||| ||||||| |||||| || ||| ||| Sbjct 1037543 CCTGCGACATTGCTAAGGAGCTTGGCCCCTACGAGACATATGAGGGCTCGCCCATCTCCA 1037602 Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGA 76458 | || | |||||||| ||| |||||| || || || | | || | |||||||| Sbjct 1037603 AGGGTGAGCTTCAGTATGACCTGTGGG-GCGTCAAGCCCACCGATC-TTTGGGACTGGGA 1037660 Query 76459 TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAAT 76518 | || |||| || || | ||| | || ||| || | | || || || Sbjct 1037661 GGCGCTGAAGGCGAAGATTGCTCAGCACGGTGTCCGCAACTCGCTACTCGTCGCGCCCAT 1037720 Query 76519 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAAC 76578 ||| || ||||||||| | || || | || || || || ||||| || || |||||| | Sbjct 1037721 GCCTACTGCCTCCACCTCCCAGATTCTCGGCAACAACGAGTGCTTCGAGCCCTACACATC 1037780 Query 76579 AAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCG- 76637 ||||||||| | | || || |||||||| ||||||| | ||| | Sbjct 1037781 GAACATCTACTCTCGCCGCGTGCTTGCTGGTGAGTTCCAGGTTGTCAA----CCCCTGGT 1037836 Query 76638 ---TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 76694 |||| ||||| | || ||||||||| || || | |||||| | | ||| | Sbjct 1037837 TGCTCAAGGACCTGGTCGACATGGGTCTCTGGACCGAGAACATGAAGAACCGCATCATCG 1037896 Query 76695 AAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACC 76754 | ||||||||||||||| ||| | | ||||| || || ||||||| ||| ||| Sbjct 1037897 CTGAGGGTGGTTCCATTCAGCGCATCCCCAACATCCCTGACGAGATCAAGACTCTGTACA 1037956 Query 76755 GCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCT 76814 || || ||||| ||| | | |||| | |||||||| || |||||| || Sbjct 1037957 AGACCGTCTGGGAGATCTCGCAGCGTACCATCATCCAGATGGCCGCTGACCGTGGTGCCT 1038016 Query 76815 TCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCT 76872 |||| |||| |||| ||| |||| | |||| | || || ||| |||| | Sbjct 1038017 TCATCGATC--AGTCTCAGTCCCTGAACATCCACATGAAGGAGCCTACTATGGGCAAGAT 1038074 Query 76873 CTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | | || ||||| | | ||||| | || ||||| ||||| |||||||| ||||| Sbjct 1038075 CACATCCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACCGGCATGTACTACCTCCG 1038134 >seq21 Length=968111 Score = 82.4 bits (90), Expect = 9e-11 Identities = 158/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || ||||| ||||| ||||| ||||| | ||| |||||||| || ||||| | Sbjct 87224 GGCGCTAAGATTCCCCGCGGCGCTGTTCTCTCTGGTCCCCCAGGTACCGGTAAGACATTG 87283 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAA 175393 || ||| |||| || || || || || || ||| || |||| || || | | Sbjct 87284 CTTGCCAAGGCCACAGCTGGCGAGTCTGGCGTGCCTTTCTTC-AGTG-TCAGCGGTTCCG 87341 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | || || |||||||| || ||||| ||||| | || || || || || | | || Sbjct 87342 AATTCGTTGAGATGTTCGTCGGTGTTGGTGCATCGCGAGTACGAGACCTGTTCGCCAACG 87401 Query 175454 CCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 | ||| || | || ||||||||| ||||||| ||||||||||| || Sbjct 87402 CGCGC-AAGAGCACACCATGTATCATCTTCATCGATGAGATTGACGC 87447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567974347840