Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 2e-15 >seq4 Length=1699079 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || || ||| || || || || ||||| || || Sbjct 982773 ACCACCACGGAGACGGAGCACCAAGTGGAGTGTGGATTCCTTCTGAATATTGTAGTCCGA 982714 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || || | || || || || || || | || |||||||| | || Sbjct 982713 GAGTGTGCGACCATCCTCTAGCTGCTTACCAGCGAAGATAAGGCGTTGCTGATCAGGGGG 982654 Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | ||||| ||||| ||| || || || |||| ||| | |||||| ||| ||| Sbjct 982653 GATGCCTTCCTTGTCCTGAATCTTGCTCTT--GACATTGTCGATAGTGTCGGATGACTCC 982596 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| |||||||| || || || | || || || |||||||||||| Sbjct 982595 ACCTCAAGGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 982545 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || |||||||||||||| | || || | || || | || Sbjct 982236 TGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGACAAAGTACGACCATCCTCGAGCTGC 982177 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAAT-TTT 33665 || ||||| || ||||| |||||||| ||| | || | ||||| ||||| ||| || Sbjct 982176 TTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGAATCTTG 982117 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || || |||| ||| | |||||| ||| ||||| |||| |||||||| ||||| | Sbjct 982116 CTCTT--GACATTGTCGATAGTGTCGGATGACTCCACCTCAAGGGTGATCGTCTTACCGG 982059 Query 33725 T 33725 | Sbjct 982058 T 982058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703126674560