Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq17 114 1e-20 >seq17 Length=1134567 Score = 114 bits (126), Expect = 1e-20 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| |||| ||||||||| |||||||| || || ||||| ||||| || |||| | Sbjct 752499 CGAAGTGCCGCCACTGGAAGCCGTACACAGGCCCAAGGTCCCCCTCCTCGTGGTGCGTCA 752440 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTT 30132 |||| | |||||| | | | ||||||||| ||||||||||||| | || ||| Sbjct 752439 AGCCAACGCTATCCAAATATGCGCGCGAACCGTTGCCGTCCCAGATCTTGATGCCGGCTT 752380 Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192 || | |||| ||| | | ||||||||| | |||||| |||||||| ||||||| Sbjct 752379 CTTG--GAGCGACTTGTAATGTGTGGACCCCGCAATGAACCATAGCAGCTCTCCCACGAC 752322 Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 ||| | || || | |||||| || |||||||| Sbjct 752321 GGCTCGCAGGAAAACGCGCTTGGTTGTAAGGAGGGG 752286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162120875148