Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq14 102 7e-17 >seq14 Length=1191321 Score = 102 bits (112), Expect = 7e-17 Identities = 283/428 (66%), Gaps = 12/428 (3%) Strand=Plus/Minus Query 4272 ACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAAC 4331 || ||||| ||||||||||| || ||||| | | |||||| || ||||| ||||| || Sbjct 901138 ACACGCTTCTCGAAGAAATTGGTCTTGCCGGCGAGCGAAATGTTCTCCATGAAATCGAAG 901079 Query 4332 GGATTAGTTGCGTTGTAATGTTT----TTCACACTTTAGAGCTACAAGCAATCGGTCAGC 4387 || || || |||||||| | || || || || || | |||| |||||||| Sbjct 901078 GGGTTGGTAGCGTTGTAGTACTTGGGGTTGCCA----AGGGCCAAGAGCAGACGGTCAGC 901023 Query 4388 TACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA-ATCTCACAGGTA 4446 || || || || ||||| | ||||||| | ||| || || | | | | || || | Sbjct 901022 AACGAACTCGATGTACTGACACATGAGTGTGGCGTTCATGCCGAGCAGAGCACA-GGGAA 900964 Query 4447 GCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTT 4506 | |||| || || ||||| || || || || || || || ||||| ||| | | | Sbjct 900963 GAGCGTCTGACAGGAACTCCTGCTCGATTGTGACAGCCTCGGTGATGATAGCCTCGACAG 900904 Query 4507 TATCTTTAGATGGTTTATTTACTAAGTA-TCCAAACAATAAACACGCAAAATCACAATGC 4565 || || | ||| || | || | |||||| || || |||||||| ||| Sbjct 900903 CCTCCTT-GCTGGGACGGTTGTTGAGGAGAGAAAACAACAAGCAGGCAAAATCTGTGTGC 900845 Query 4566 AAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTC 4625 | || || || | || || ||||| || || || | |||||||| | ||| | | Sbjct 900844 ATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAATGTGAGACCGGGCATGAGACCACGC 900785 Query 4626 TTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCA 4685 ||||| ||||| || || | || || || ||| ||||| || || || ||||| || Sbjct 900784 TTTTTCAGCCAGAAGATGGACGCGAAGGAACCACTGAAGAAGATACCCTCAACGGCAGCG 900725 Query 4686 AACGCTAC 4693 || || || Sbjct 900724 AAGGCGAC 900717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048465382594