Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq4 111 4e-19 >seq4 Length=1699079 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || |||||||| ||||| || || ||||||||||||| ||||| | ||||| Sbjct 982246 GAGGACGAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGACAAAGTACGACCATC 982187 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| | | ||||||||| | | ||| |||||||| || Sbjct 982186 CTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATGCCTTCCTTGTC 982127 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || |||||| | || | |||| || ||| || ||||| || || || Sbjct 982126 CTGAATCTTGCTCTTGACATTGTCGATAGTGTCGGATGACTCCACCTCAAGGGTGATCGT 982067 Query 152072 TTTGCCCGTGA 152082 || || |||| Sbjct 982066 CTTACCGGTGA 982056 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || || || || || || ||||| || | | || | Sbjct 982764 GAGACGGAGCACCAAGTGGAGTGTGGATTCCTTCTGAATATTGTAGTCCGAGAGTGTGCG 982705 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| ||||| || || ||||||||||| | ||||| || | | ||| ||||| Sbjct 982704 ACCATCCTCTAGCTGCTTACCAGCGAAGATAAGGCGTTGCTGATCAGGGGGGATGCCTTC 982645 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || |||||| | || | |||| || ||| || ||||| || Sbjct 982644 CTTGTCCTGAATCTTGCTCTTGACATTGTCGATAGTGTCGGATGACTCCACCTCAAGGGT 982585 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| ||||||| |||||| Sbjct 982584 GATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 982546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153817577234278