Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq496 158 3e-33
>seq496
Length=30664
Score = 158 bits (174), Expect = 3e-33
Identities = 190/256 (74%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || || || || || | || | |||||| || |||||| |||| |||||
Sbjct 5593 ATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTACCGACGCTCTTCCC-GTCGC 5651
Query 230446 CTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
| | | |||||||||||| || ||| | ||||||||||| || || ||||||||| |
Sbjct 5652 CCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGAGTTTGTTGCCGACCGCCT 5711
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| || || ||||| || |||| | |||||||| | |||||||| | || |||||
Sbjct 5712 GCTGGTGGCTCTTGGCAACAAGAAGTTCTACAACTCGACCAACCCCTTCGACTTCATGGA 5771
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
| ||||||||| | || ||||||||||||||||| |||||||| ||||||| || |
Sbjct 5772 GAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAAA 5831
Query 230625 GCCTGGTGTGATGAAG 230640
| | ||||| ||| ||
Sbjct 5832 GGCCGGTGTCATGGAG 5847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057805824930830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |