Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq496 158 3e-33 >seq496 Length=30664 Score = 158 bits (174), Expect = 3e-33 Identities = 190/256 (74%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || || | || | |||||| || |||||| |||| ||||| Sbjct 5593 ATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTACCGACGCTCTTCCC-GTCGC 5651 Query 230446 CTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 | | | |||||||||||| || ||| | ||||||||||| || || ||||||||| | Sbjct 5652 CCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGAGTTTGTTGCCGACCGCCT 5711 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | || || ||||| || |||| | |||||||| | |||||||| | || ||||| Sbjct 5712 GCTGGTGGCTCTTGGCAACAAGAAGTTCTACAACTCGACCAACCCCTTCGACTTCATGGA 5771 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||||||||| | || ||||||||||||||||| |||||||| ||||||| || | Sbjct 5772 GAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAAA 5831 Query 230625 GCCTGGTGTGATGAAG 230640 | | ||||| ||| || Sbjct 5832 GGCCGGTGTCATGGAG 5847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057805824930830