Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq838 131 2e-25
>seq838
Length=49465
Score = 131 bits (144), Expect = 2e-25
Identities = 416/649 (64%), Gaps = 56/649 (9%)
Strand=Plus/Minus
Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730
|| ||| | |||||||| |||||| |||| |||||||||||| ||||| |||| | |||
Sbjct 13644 CAACTGCACCTTCAGGGCCTCCACATGGTCGAGGTAGACGTGGGCGTCGCCCATGGTGTG 13585
Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
| | |||||| | ||| | || ||| || | ||| | |||||||| | |||
Sbjct 13584 CGTTAGCGAGCCGGGCACCAGGTCGCAGACGTGCGCCAGCATATGCGTCAGCAGCGCGTA 13525
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTG--- 145847
|||||| |||||||| ||||| || ||||||||||| | || || ||||||| | |
Sbjct 13524 GCTGGCAATGTTGAAAGGCACGCCGAGCCCCATGTCGCAGGACCGTTGGTACAACAGCGT 13465
Query 145848 --GCAGGA--------------GAGC--------------TCCCCGC------CCGC--- 145868
|||| | || | || |||| ||||
Sbjct 13464 GTGCAGAACGCCCTTTTGCTTGGATCCCTCTTCGCCGTTTTCGCCGCGCTTGGCCGCGGG 13405
Query 145869 ------CACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGT 145921
||| |||||||| ||| | | |||||| |||||||| ||||| ||| |
Sbjct 13404 AAAGCTCACATAGAACTGCGCA-AACATGTGGCAAGGCGGCAGCGCCATCTTCTTCAGTT 13346
Query 145922 CCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCT 145978
|| |||||||| ||| | | || || | | || ||| || || | | ||
Sbjct 13345 GGGCGGGGTTCCACGCGCTCATGATGA---TGCGGCGGTCGAAAGGCTTGTTGCGCAGCT 13289
Query 145979 CCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCA 146038
| || | || |||||||| ||||| || || ||| || | | | |||||
Sbjct 13288 TGTCGATGACTTCGGCCAGCTGGTCGACGCCTTGTCCGGTGTAGTCGGCGTGGCAGTCCT 13229
Query 146039 CGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCT 146098
|||| |||| || || |||| ||| ||||| ||||| || || || ||||| || |
Sbjct 13228 TGTACTCGGCGCCAAAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGGTCGCCCTCTT 13169
Query 146099 CCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCT 146158
| | ||| ||||| ||| | | | | || || || || ||||||||| |||||||||| |
Sbjct 13168 CGCGGTGTCCCAGTCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCCGTCCCAGATTT 13109
Query 146159 TGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCT 146218
||| || | || ||| || ||| |||| ||| |||||||| |||||||
Sbjct 13108 TGATTCCTGCATCTGACAGCGGCTTCGAGGACGTGCTGCCCGAAATGAACCACAGCAGCT 13049
Query 146219 CTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267
| | | ||| | | | || || | ||||||||| || || || ||
Sbjct 13048 CGGCAATGACGGCGCGCAGAAATACGCGCTTGGTGGTGAGAAGCGGCAA 13000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590066908837640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |