Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq838 131 2e-25 >seq838 Length=49465 Score = 131 bits (144), Expect = 2e-25 Identities = 416/649 (64%), Gaps = 56/649 (9%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 || ||| | |||||||| |||||| |||| |||||||||||| ||||| |||| | ||| Sbjct 13644 CAACTGCACCTTCAGGGCCTCCACATGGTCGAGGTAGACGTGGGCGTCGCCCATGGTGTG 13585 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | |||||| | ||| | || ||| || | ||| | |||||||| | ||| Sbjct 13584 CGTTAGCGAGCCGGGCACCAGGTCGCAGACGTGCGCCAGCATATGCGTCAGCAGCGCGTA 13525 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTG--- 145847 |||||| |||||||| ||||| || ||||||||||| | || || ||||||| | | Sbjct 13524 GCTGGCAATGTTGAAAGGCACGCCGAGCCCCATGTCGCAGGACCGTTGGTACAACAGCGT 13465 Query 145848 --GCAGGA--------------GAGC--------------TCCCCGC------CCGC--- 145868 |||| | || | || |||| |||| Sbjct 13464 GTGCAGAACGCCCTTTTGCTTGGATCCCTCTTCGCCGTTTTCGCCGCGCTTGGCCGCGGG 13405 Query 145869 ------CACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGT 145921 ||| |||||||| ||| | | |||||| |||||||| ||||| ||| | Sbjct 13404 AAAGCTCACATAGAACTGCGCA-AACATGTGGCAAGGCGGCAGCGCCATCTTCTTCAGTT 13346 Query 145922 CCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCT 145978 || |||||||| ||| | | || || | | || ||| || || | | || Sbjct 13345 GGGCGGGGTTCCACGCGCTCATGATGA---TGCGGCGGTCGAAAGGCTTGTTGCGCAGCT 13289 Query 145979 CCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCA 146038 | || | || |||||||| ||||| || || ||| || | | | ||||| Sbjct 13288 TGTCGATGACTTCGGCCAGCTGGTCGACGCCTTGTCCGGTGTAGTCGGCGTGGCAGTCCT 13229 Query 146039 CGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCT 146098 |||| |||| || || |||| ||| ||||| ||||| || || || ||||| || | Sbjct 13228 TGTACTCGGCGCCAAAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGGTCGCCCTCTT 13169 Query 146099 CCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCT 146158 | | ||| ||||| ||| | | | | || || || || ||||||||| |||||||||| | Sbjct 13168 CGCGGTGTCCCAGTCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCCGTCCCAGATTT 13109 Query 146159 TGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCT 146218 ||| || | || ||| || ||| |||| ||| |||||||| ||||||| Sbjct 13108 TGATTCCTGCATCTGACAGCGGCTTCGAGGACGTGCTGCCCGAAATGAACCACAGCAGCT 13049 Query 146219 CTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | | ||| | | | || || | ||||||||| || || || || Sbjct 13048 CGGCAATGACGGCGCGCAGAAATACGCGCTTGGTGGTGAGAAGCGGCAA 13000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590066908837640