Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq923 111 2e-19
seq670 89.7 6e-13
seq731 86.0 7e-12
>seq923
Length=2568
Score = 111 bits (122), Expect = 2e-19
Identities = 170/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 42949 CCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 43008
|||| || || || | | ||| | ||||||||||| || |||||| || || ||||
Sbjct 336 CCTACTGACCACCACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGT 277
Query 43009 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 43068
| || | || |||| | || || |||||||| || ||||| || | ||||||||||
Sbjct 276 AGTCCGACAACGTCCTGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGT 217
Query 43069 CGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCT 43126
| | ||| | || |||||||||| ||| | || | |||| ||| | | | ||| ||
Sbjct 216 CAGGCGGGATGCCCTCCTTGTCC-TGAATCTTCGACTTGA-CGTTGTCAATCGTATCCGA 159
Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || |||| |||||| || || || || || ||||| || ||||| |||||
Sbjct 158 AGATTCGACCTCGAGCGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
>seq670
Length=49272
Score = 89.7 bits (98), Expect = 6e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || | || || || |||| || |||||||| || ||||| |
Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || |||| |
Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | ||||| || || || |||| |||||||| |||||||| || ||||| || |
Sbjct 38528 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 38587
Query 43174 AG 43175
||
Sbjct 38588 AG 38589
>seq731
Length=88763
Score = 86.0 bits (94), Expect = 7e-12
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || || || |||| || |||||||| ||||||||
Sbjct 88618 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAA 88559
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | || ||||||||| ||| || |||| |||
Sbjct 88558 GATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGA-CGT 88500
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | | ||||| || || || |||| |||||||| ||||| ||
Sbjct 88499 TGTCGATGGTGTCCGAAGACTCGACTTCGAGGGTGATGGTCTTGCCGGT 88451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571808014907480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |