Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq923 116 2e-21
seq731 109 4e-19
seq670 100 2e-16
seq363 91.5 1e-13
>seq923
Length=2568
Score = 116 bits (128), Expect = 2e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| || | ||| || ||||| ||||||||||| |||| | | | | ||
Sbjct 313 AGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCATCC 254
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296
|| | ||||||||||||||| || | ||||||||||| | |||| | || |||||||||
Sbjct 253 TCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGG-ATGCCCTCCTTGTC 195
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | | |||| ||| | |||||||| || | |||||| ||
Sbjct 194 CTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGT 135
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| ||||| || || || || |||||||||||
Sbjct 134 CTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
>seq731
Length=88763
Score = 109 bits (120), Expect = 4e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| ||||| | || || ||||| | || || ||||| ||||||||||||||
Sbjct 88369 CCGCCACGCAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 88310
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| || || ||||||||||| |||
Sbjct 88309 AGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGA 88250
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | |||| || |||||
Sbjct 88249 ATGCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACC 88190
Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367
|| | |||||||| ||||||||||
Sbjct 88189 TCAAGGGTGATGGTCTTGCCGGTGA 88165
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || ||||| | ||| || ||||| ||||||||||||||
Sbjct 88653 CCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 88594
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| ||||||||||| ||
Sbjct 88593 AGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 88534
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | || | || |||||
Sbjct 88533 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACT 88474
Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367
|| | |||||||| ||||||||||
Sbjct 88473 TCGAGGGTGATGGTCTTGCCGGTGA 88449
>seq670
Length=49272
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||||| || ||| |||| || | ||||||||| ||||| ||
Sbjct 38410 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 38469
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| ||||||||||| ||| | || ||||||||| ||||| ||| | || | |
Sbjct 38470 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 38529
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | || | || ||||| || | |||||||| ||||| || || || || || |||
Sbjct 38530 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAG 38589
>seq363
Length=34683
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| |||||||| | || || ||||| ||||||||||| ||
Sbjct 5293 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 5352
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | ||||||||| ||||| || | |||||||||||| |||
Sbjct 5353 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGA 5412
Query 34283 ACGCTCTCCTTGTCGGCTAT 34302
| || ||||||||| || ||
Sbjct 5413 ATGCCCTCCTTGTCTGCAAT 5432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323066719892960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |