Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq670 95.1 1e-14 seq923 89.7 4e-13 seq363 89.7 4e-13 >seq670 Length=49272 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| || ||| |||| || || || || |||||||| | Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||| ||||| || || | |||||||||||| || || ||| || Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | ||||| ||| ||||| | ||| || |||||||||||||| ||||| || | Sbjct 38528 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 38587 Query 45327 AG 45328 || Sbjct 38588 AG 38589 >seq923 Length=2568 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTG-GCGATCGTCG 45184 ||||| ||||| || ||||||||| ||||||||||| || || || ||| ||| Sbjct 310 ACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCATCCTCG 251 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || ||||| ||||| ||||| ||||| || || | |||||||||||| Sbjct 250 ---AGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 194 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 ||| || ||| | || | || | | ||| | || ||||| | || ||||| Sbjct 193 TGAATCTTCGACTTGA-CGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGT 135 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || ||||| ||||| || ||||| ||||| Sbjct 134 CTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102 >seq363 Length=34683 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| ||||||||||| || ||| |||| || Sbjct 5311 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 5370 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||| ||||| |||||||| || | ||||||||||| ||| Sbjct 5371 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCTGCA 5430 Query 45248 AT 45249 || Sbjct 5431 AT 5432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395068743113161