Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq670 95.1 1e-14
seq923 89.7 4e-13
seq363 89.7 4e-13
>seq670
Length=49272
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206
||||||| |||||||||||| || ||| |||| || || || || |||||||| |
Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467
Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266
||| ||||| ||||| || || | |||||||||||| || || ||| ||
Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527
Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
| | | ||||| ||| ||||| | ||| || |||||||||||||| ||||| || |
Sbjct 38528 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 38587
Query 45327 AG 45328
||
Sbjct 38588 AG 38589
>seq923
Length=2568
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/213 (71%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTG-GCGATCGTCG 45184
||||| ||||| || ||||||||| ||||||||||| || || || ||| |||
Sbjct 310 ACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCATCCTCG 251
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || ||||| ||||| ||||| ||||| || || | ||||||||||||
Sbjct 250 ---AGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 194
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
||| || ||| | || | || | | ||| | || ||||| | || |||||
Sbjct 193 TGAATCTTCGACTTGA-CGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGT 135
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| || ||||| ||||| || ||||| |||||
Sbjct 134 CTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
>seq363
Length=34683
Score = 89.7 bits (98), Expect = 4e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| ||||||||||| || ||| |||| ||
Sbjct 5311 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 5370
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| ||||| |||||||| || | ||||||||||| |||
Sbjct 5371 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCTGCA 5430
Query 45248 AT 45249
||
Sbjct 5431 AT 5432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395068743113161
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |