Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq546 329 3e-85
seq496 150 2e-31
seq923 95.1 1e-14
seq731 86.0 6e-12
seq670 86.0 6e-12
>seq546
Length=57559
Score = 329 bits (364), Expect = 3e-85
Identities = 651/959 (68%), Gaps = 6/959 (1%)
Strand=Plus/Plus
Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080
|||| ||||| | |||||| || || ||||| || | ||||||||| ||||| |||
Sbjct 43238 GCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCG 43297
Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140
|| || ||| | || ||||| | || |||||||||| || || |||||
Sbjct 43298 CAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 43357
Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200
| ||||||||||||||| | || |||| |||||| ||| | ||||| ||| || |
Sbjct 43358 GCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATAC 43417
Query 23201 CACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTA 23259
|||| | || ||| | || ||| | || | | |||||| |||||| | | |||
Sbjct 43418 CACAGCTTTTGGGCGCGGACT-GTCTCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTA 43476
Query 23260 CAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACAT 23319
| | | || || ||| | ||||| |||||| || || || | | || || |
Sbjct 43477 GAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGGCAAAA 43536
Query 23320 GAGACTCCACATTGAGTCATTT--TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGA 23377
|||| |||| || | ||| || || || |||| || ||||| || ||||| |
Sbjct 43537 GAGAGTCCA--TTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAAC 43594
Query 23378 GCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAA 23437
||||| || || ||||| ||||| |||||||| || ||| |||||| | || |
Sbjct 43595 GCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGG 43654
Query 23438 AAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTA 23497
||| || ||||| || ||||| ||||| ||||| | |||||| || || || | |||
Sbjct 43655 AAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTG 43714
Query 23498 TTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGA 23557
||||| || || |||||||| || || ||||||||||| |||| ||||| || | ||
Sbjct 43715 TTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGG 43774
Query 23558 CCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACG 23617
|||||||| | ||| ||| || | || ||| | | |||| ||| |||
Sbjct 43775 CCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGGTGGACG 43834
Query 23618 TGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAG 23677
| || ||| || || ||| ||| || || ||||| || || || |||||||||||
Sbjct 43835 TTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAA 43894
Query 23678 ATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTG 23737
|| ||||||||||||||||| || | ||| |||||| || || | | || | |||
Sbjct 43895 ATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTG 43954
Query 23738 GGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGA 23797
|| ||| | || ||||| || ||| ||| || |||||| | | |||||| |
Sbjct 43955 GGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCAAC 44014
Query 23798 TTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATC 23857
|||||||| |||| ||| ||||| || ||||| ||||||| || || |||||
Sbjct 44015 TTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCATG 44074
Query 23858 ATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGC 23917
||||||| || ||||| ||| | ||| || || | || ||||| | | |
Sbjct 44075 ATCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCGAAGCAAGTATGACCTCTCC 44134
Query 23918 ATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
| || || || |||||||| | ||||| |||||||| |||| || ||||| || ||
Sbjct 44135 AGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTCACGGTCGTAGACGATGGCGGAGTT 44193
>seq496
Length=30664
Score = 150 bits (166), Expect = 2e-31
Identities = 316/462 (68%), Gaps = 18/462 (4%)
Strand=Plus/Plus
Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034
|| || || || || || ||||| ||||| ||||| || ||| ||| | || ||
Sbjct 5392 CTGATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTCGCGTCCATCTTC 5451
Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094
||| | ||||| || ||||||||||| ||||| || || ||||||| | || || ||
Sbjct 5452 TGGCTCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGT 5511
Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT--TGTCAATAAAC 58152
|||||||| | || || || ||||| ||||| | | ||||||||| ||| || |
Sbjct 5512 GACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCACATCAAGTC--CAAGC 5569
Query 58153 CGACGCGGGATCGCATCTTG-GA-CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210
| ||| || | | | | || || ||||||||||| |||| ||| || | |||||
Sbjct 5570 CTTCGCCCGA--GACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTT 5627
Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270
| ||||| || || || || ||| ||||||| |||||| | | |||| ||||
Sbjct 5628 CCTTACCGACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTA 5687
Query 58271 CATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG-----AGAGCGTCATTAC 58325
||| ||||||||||||||| | || || | | || |||| ||| || |||
Sbjct 5688 CATCGAGTTTGTTGCCGACCGCCTGCTGGTGG--CT-CTTGGCAACAAGAAGTTC--TAC 5742
Query 58326 AACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTT 58385
||| ||| || || || || || ||| | || |||||| | |||||||| |||||
Sbjct 5743 AACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTC 5802
Query 58386 TTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427
||||| || ||| | || || ||||| ||| || |||
Sbjct 5803 TTCGAGAAGCGTGTTGGTGACTACCAAAAGGCCGGTGTCATG 5844
>seq923
Length=2568
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| || || |||||||| |||| || ||| | ||
Sbjct 102 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 161
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | ||||| || || ||||||||| ||| | ||||| ||||||
Sbjct 162 GATACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 221
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||| ||||| ||| | || || | ||| || || || |||
Sbjct 222 CAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAAC 281
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || || || || ||| |||| ||
Sbjct 282 ATCCAGAAGGAGTCTACCCTGCATTTGGTGCT 313
>seq731
Length=88763
Score = 86.0 bits (94), Expect = 6e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276
|| ||||| || |||||| | || || || | ||||||| |||| | || ||
Sbjct 88167 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGTCC 88226
Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336
| || ||||||||| ||| | || || |||||||||||||| || |||||||||||
Sbjct 88227 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCTGGCAAG 88286
Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396
||| | || ||| | || | ||| || ||||| || || || ||||| || ||
Sbjct 88287 CAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCAC 88346
Query 31397 CTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || | ||| | |||||||
Sbjct 88347 CTCGTCCTCCGCCTGCGTGGCGGTA 88371
Score = 82.4 bits (90), Expect = 7e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276
|| ||||| || |||||| |||| || || | || |||| |||| | ||||| |
Sbjct 88451 ACCGGCAAGACCATCACCCTCGAAGTCGAGTCTTCGGACACCATCGACAACGTCAAGTCG 88510
Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336
| || |||||||| ||| | || || ||||||||||| || || |||||||||||
Sbjct 88511 AAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAG 88570
Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396
||| | || ||| | || | ||| || ||||| || || || || ||||| ||
Sbjct 88571 CAGCTTGAGGACGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 88630
Query 31397 CTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || | ||| | || ||||
Sbjct 88631 CTCGTCCTGCGTCTGCGTGGTGGTA 88655
>seq670
Length=49272
Score = 86.0 bits (94), Expect = 6e-12
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| ||||| ||||| || |||||| |||| || || | || |||| ||
Sbjct 38588 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 38529
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || ||||||||| ||| | || || ||||||||||| ||
Sbjct 38528 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 38469
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGAC 31348
|| ||||| ||||| ||| | || |||
Sbjct 38468 ATCTTCGCCGGCAAGCAGCTCGAGGAC 38442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445758927840720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |