Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq496 111 3e-19 seq546 100 6e-16 >seq496 Length=30664 Score = 111 bits (122), Expect = 3e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 ||||||||||||| || || || |||||||| || ||| | ||||| ||||| |||||| Sbjct 5396 TTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTCGCGTCCATCTTCTGGC 5455 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 ||||||| | || | ||||||| || |||| |||||| ||| |||| || | |||| Sbjct 5456 TCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGACG 5515 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | || | || ||||||||| ||| |||| || Sbjct 5516 AGGGCATGCACACCGACTTTGCCTGCCTGCTCTT 5549 >seq546 Length=57559 Score = 100 bits (110), Expect = 6e-16 Identities = 168/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 94791 TCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 ||| || || |||||||| || || || ||| ||||| || ||||||||||| || Sbjct 43846 TCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAATACCCTCGAT 43905 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACA 94910 ||| || || | | | | | | |||||| || | ||| ||||| || || ||| Sbjct 43906 GCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGC 43965 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || |||| |||||||| ||||| ||||| | | |||||| | | || ||||| Sbjct 43966 GTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCAACTTGTACGTTTC 44025 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 | | || | |||||| ||||| || |||||||| |||||||| ||||||| ||| Sbjct 44026 GAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCATGATCATGTGCTG 44085 Query 95031 AGG 95033 || Sbjct 44086 CGG 44088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989566997400655