Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq496 111 3e-19
seq546 100 6e-16
>seq496
Length=30664
Score = 111 bits (122), Expect = 3e-19
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
||||||||||||| || || || |||||||| || ||| | ||||| ||||| ||||||
Sbjct 5396 TTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTCGCGTCCATCTTCTGGC 5455
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
||||||| | || | ||||||| || |||| |||||| ||| |||| || | ||||
Sbjct 5456 TCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGACG 5515
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
| || | || ||||||||| ||| |||| ||
Sbjct 5516 AGGGCATGCACACCGACTTTGCCTGCCTGCTCTT 5549
>seq546
Length=57559
Score = 100 bits (110), Expect = 6e-16
Identities = 168/243 (69%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 94791 TCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850
||| || || |||||||| || || || ||| ||||| || ||||||||||| ||
Sbjct 43846 TCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAATACCCTCGAT 43905
Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACA 94910
||| || || | | | | | | |||||| || | ||| ||||| || || |||
Sbjct 43906 GCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGC 43965
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|| |||| |||||||| ||||| ||||| | | |||||| | | || |||||
Sbjct 43966 GTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCAACTTGTACGTTTC 44025
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030
| | || | |||||| ||||| || |||||||| |||||||| ||||||| |||
Sbjct 44026 GAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCATGATCATGTGCTG 44085
Query 95031 AGG 95033
||
Sbjct 44086 CGG 44088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989566997400655
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |