Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq838 111 1e-19 >seq838 Length=49465 Score = 111 bits (122), Expect = 1e-19 Identities = 403/629 (64%), Gaps = 64/629 (10%) Strand=Plus/Minus Query 20924 CAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCC 20983 ||||| || || |||| | ||| ||||||||||| |||| ||||||| | || Sbjct 13632 CAGGGCCTCCACATGGTCGAGGTAGACGTGGGCGTCGCCCATGGTGTGCGTTAGCGAGCC 13573 Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043 || |||| | |||||| || | || || |||||| || ||||||||||| ||||| Sbjct 13572 GGGCACCAGGTCGCAGACGTGCGCCAGCATATGCGTCAGCAGCGCGTAGCTGGCAATGTT 13513 Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTG-----GCAGGAC--- 21095 || || || ||||| ||||||||| ||||| ||||||| | | |||| || Sbjct 13512 GAAAGGCACGCCGAGCCCCATGTCGCAGGACCGTTGGTACAACAGCGTGTGCAGAACGCC 13453 Query 21096 ---------AGCTCC--------------CCCCGAGC-----------------CACGTA 21115 | ||| | ||| || ||| || Sbjct 13452 CTTTTGCTTGGATCCCTCTTCGCCGTTTTCGCCGCGCTTGGCCGCGGGAAAGCTCACATA 13393 Query 21116 AAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCC 21174 ||||| | |||| | ||| ||||| || || |||||| | || | |||||||||| Sbjct 13392 GAACTG-CGCAAACATGTGGCAAGGCGGCAGCGCCATCTTCTTCAGTTGGGCGGGGTTCC 13334 Query 21175 ACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAG---ATCCACCACGT 21231 |||||| ||| | |||||| || ||| | || |||| || || | || | Sbjct 13333 ACGCGCTCATGATGATGCGGCGGTCGAAAG---GCTTGTTGCGCAGCTTGTCGATGACTT 13277 Query 21232 AACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCC 21291 ||||||||| || || || || ||||| ||||| | || ||||||| || | Sbjct 13276 CGGCCAGCTGGTCGACGCCTTGTCCGGTGTAGTCGGCGTGGCAGTCCTTGTACTCGGCGC 13217 Query 21292 CAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGA 21351 ||||||| | ||| ||||| ||||| || || || || |||||||| ||||| || Sbjct 13216 CAAAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGGTCGCCCTCTTCGCGGTGTCC-C 13158 Query 21352 AGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCC-GCG 21409 || || ||| | ||| ||| | || ||||||| ||||||| ||||| | || || Sbjct 13157 AGTCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCCGTCCCAGATTTTGATTCCTGCA 13098 Query 21410 GCGCGACAGTTCGG--TGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACG 21467 | ||||| ||| | ||| ||| |||| || |||||||||| ||| | | | Sbjct 13097 TC-TGACAG--CGGCTTCGAGGACGTGCTGCCCGAAATGAACCACAGCAGCTCGGCAATG 13041 Query 21468 ACGCCCCTCCAAAACACCCTTTTGGTGGT 21496 ||| | | | ||| || | |||||||| Sbjct 13040 ACGGCGCGCAGAAATACGCGCTTGGTGGT 13012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427769008669680