Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq838 111 1e-19
>seq838
Length=49465
Score = 111 bits (122), Expect = 1e-19
Identities = 403/629 (64%), Gaps = 64/629 (10%)
Strand=Plus/Minus
Query 20924 CAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCC 20983
||||| || || |||| | ||| ||||||||||| |||| ||||||| | ||
Sbjct 13632 CAGGGCCTCCACATGGTCGAGGTAGACGTGGGCGTCGCCCATGGTGTGCGTTAGCGAGCC 13573
Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043
|| |||| | |||||| || | || || |||||| || ||||||||||| |||||
Sbjct 13572 GGGCACCAGGTCGCAGACGTGCGCCAGCATATGCGTCAGCAGCGCGTAGCTGGCAATGTT 13513
Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTG-----GCAGGAC--- 21095
|| || || ||||| ||||||||| ||||| ||||||| | | |||| ||
Sbjct 13512 GAAAGGCACGCCGAGCCCCATGTCGCAGGACCGTTGGTACAACAGCGTGTGCAGAACGCC 13453
Query 21096 ---------AGCTCC--------------CCCCGAGC-----------------CACGTA 21115
| ||| | ||| || ||| ||
Sbjct 13452 CTTTTGCTTGGATCCCTCTTCGCCGTTTTCGCCGCGCTTGGCCGCGGGAAAGCTCACATA 13393
Query 21116 AAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCC 21174
||||| | |||| | ||| ||||| || || |||||| | || | ||||||||||
Sbjct 13392 GAACTG-CGCAAACATGTGGCAAGGCGGCAGCGCCATCTTCTTCAGTTGGGCGGGGTTCC 13334
Query 21175 ACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAG---ATCCACCACGT 21231
|||||| ||| | |||||| || ||| | || |||| || || | || |
Sbjct 13333 ACGCGCTCATGATGATGCGGCGGTCGAAAG---GCTTGTTGCGCAGCTTGTCGATGACTT 13277
Query 21232 AACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCC 21291
||||||||| || || || || ||||| ||||| | || ||||||| || |
Sbjct 13276 CGGCCAGCTGGTCGACGCCTTGTCCGGTGTAGTCGGCGTGGCAGTCCTTGTACTCGGCGC 13217
Query 21292 CAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGA 21351
||||||| | ||| ||||| ||||| || || || || |||||||| ||||| ||
Sbjct 13216 CAAAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGGTCGCCCTCTTCGCGGTGTCC-C 13158
Query 21352 AGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCC-GCG 21409
|| || ||| | ||| ||| | || ||||||| ||||||| ||||| | || ||
Sbjct 13157 AGTCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCCGTCCCAGATTTTGATTCCTGCA 13098
Query 21410 GCGCGACAGTTCGG--TGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACG 21467
| ||||| ||| | ||| ||| |||| || |||||||||| ||| | | |
Sbjct 13097 TC-TGACAG--CGGCTTCGAGGACGTGCTGCCCGAAATGAACCACAGCAGCTCGGCAATG 13041
Query 21468 ACGCCCCTCCAAAACACCCTTTTGGTGGT 21496
||| | | | ||| || | ||||||||
Sbjct 13040 ACGGCGCGCAGAAATACGCGCTTGGTGGT 13012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427769008669680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |