Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq496 143 3e-29 seq731 82.4 8e-11 >seq496 Length=30664 Score = 143 bits (158), Expect = 3e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||||||||| || || ||||||| |||| |||||| | ||||| | || | ||| Sbjct 5602 GAGGCCGTCGAGATGGAGCAAGAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGGC 5661 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| ||| | |||||| ||||||||||||||||||| ||| | ||| || || Sbjct 5662 ATGAACGCTACCCTCATGTGCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCT 5721 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 || || | ||| | ||| || || |||||||| || ||| | ||||| ||| Sbjct 5722 CTTGGCAACAAGAAGTTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCG 5781 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTACAAAA 53065 ||| | ||||| || ||||| ||||||| ||||| || || ||| ||| Sbjct 5782 CTCAACGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAA 5830 >seq731 Length=88763 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || | ||| | ||| ||||| || || ||||| || ||| Sbjct 88369 CCGCCACGCAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 88310 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || ||||| || ||||| |||| ||||| ||||| || || || Sbjct 88309 AGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGA 88250 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| | || | || | | || | ||||||| || ||| || Sbjct 88249 ATGCCCTCCTTGTCC-TGAATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGAC 88191 Query 139717 CTCAACGGTCACCGTCTTGCCGGT 139740 ||||| ||| | ||||||||||| Sbjct 88190 CTCAAGGGTGATGGTCTTGCCGGT 88167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496055684727200