Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq496 143 3e-29
seq731 82.4 8e-11
>seq496
Length=30664
Score = 143 bits (158), Expect = 3e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
||||||||||| || || ||||||| |||| |||||| | ||||| | || | |||
Sbjct 5602 GAGGCCGTCGAGATGGAGCAAGAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGGC 5661
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
|||||||| ||| | |||||| ||||||||||||||||||| ||| | ||| || ||
Sbjct 5662 ATGAACGCTACCCTCATGTGCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCT 5721
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
|| || | ||| | ||| || || |||||||| || ||| | ||||| |||
Sbjct 5722 CTTGGCAACAAGAAGTTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCG 5781
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTACAAAA 53065
||| | ||||| || ||||| ||||||| ||||| || || ||| |||
Sbjct 5782 CTCAACGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAA 5830
>seq731
Length=88763
Score = 82.4 bits (90), Expect = 8e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || | || | || | ||| | ||| ||||| || || ||||| || |||
Sbjct 88369 CCGCCACGCAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 88310
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| || ||||| || ||||| |||| ||||| ||||| || || ||
Sbjct 88309 AGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGA 88250
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| | || | || | | || | ||||||| || ||| ||
Sbjct 88249 ATGCCCTCCTTGTCC-TGAATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGAC 88191
Query 139717 CTCAACGGTCACCGTCTTGCCGGT 139740
||||| ||| | |||||||||||
Sbjct 88190 CTCAAGGGTGATGGTCTTGCCGGT 88167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496055684727200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |