Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq546 158 2e-33
seq496 95.1 2e-14
>seq546
Length=57559
Score = 158 bits (174), Expect = 2e-33
Identities = 471/723 (65%), Gaps = 8/723 (1%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
||||||||||| || | || ||| | | || || |||| ||| || | | | |
Sbjct 43484 TCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGGCAAAAGAGAGTC 43543
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || || | | || || || ||||| || ||||| |||||||| | || |||
Sbjct 43544 CATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCGTAAAAG 43603
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
|| || | | | |||||| ||||| ||||| ||| |||||||| | |
Sbjct 43604 AGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAGGGGAAG 43663
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
| |||| ||||| || |||| ||| ||||| | | | || || || ||||| || ||
Sbjct 43664 ACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTGTTGCCACCT 43723
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | ||| | ||| ||||| || || |||| | ||| ||||| | || |||||
Sbjct 43724 TGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGGCCGTTGGAG 43783
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTACTAATTGATAGAC 80218
||||| ||||| || | || ||| || ||| ||||||| | ||| ||||
Sbjct 43784 GTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGGTGGACGTTG--AGAC 43841
Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278
| ||||| || ||| | || || || | || || || | || || || || ||||
Sbjct 43842 CAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAATACCCT 43901
Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338
| ||||| || || |||||| | | || || | | ||| | || |
Sbjct 43902 CGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTAC 43961
Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398
| || || || ||||| || || || || ||||| || ||||| |||| | |||||||
Sbjct 43962 CAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCAACTTGTACG 44021
Query 80399 TCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACAT 80456
| || | || | || ||| | | | || || || || || |||||||| | |||
Sbjct 44022 TTTCGAGGGC--ACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCATGATCAT 44079
Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516
|||||| |||||||| | | ||| ||| || | |||||| || | |||| ||
Sbjct 44080 GTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCGAAGCAAGTATGACCTCTCCAGTGT 44139
Query 80517 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 80576
|| ||||||||||| | ||| ||||| || ||||| | || | |||||||| |
Sbjct 44140 CTTGAAACCAAAATATTGGTAGTTGAAGTCACGGTCGTAGACGATGGCGGAGTTGAGCTC 44199
Query 80577 ATC 80579
|||
Sbjct 44200 ATC 44202
>seq496
Length=30664
Score = 95.1 bits (104), Expect = 2e-14
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||||| |||||||| | || || |||||||| || || ||
Sbjct 5540 CAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGG 5481
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| ||||||||||| || ||||| || |||||||| || || || ||||||
Sbjct 5480 CCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAG 5421
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAA 50104
|| || || || || ||||||||||
Sbjct 5420 ATACCCTCGACAGCAGCAAAGGCAA 5396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718256760019240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |