Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq496 86.0 8e-12
>seq496
Length=30664
Score = 86.0 bits (94), Expect = 8e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166
|||||||| || || || || ||||| ||||||||||| || ||||| || || |||||
Sbjct 5498 TCGTTGGAGAAGGTAAGGCCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCG 5439
Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAG 42213
|| || || |||||||| || || || || ||||||||||| ||
Sbjct 5438 AAGGAACCGCTGAAGAAGATACCCTCGACAGCAGCAAAGGCAATCAG 5392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671127950029160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |