Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq496 176 7e-39
seq546 143 4e-29
>seq496
Length=30664
Score = 176 bits (194), Expect = 7e-39
Identities = 585/899 (65%), Gaps = 86/899 (10%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| ||||||| || ||||| | || ||| | ||||||
Sbjct 4937 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCTGAGGAGATTGATCTG 4996
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTT----AT 125134
||||||||||| | || ||| | | ||| ||| ||| ||| |||| |||| ||
Sbjct 4997 TCCAAGGACCTTCATGACTGGAACAAGCGTCTGAATGA---TGA-CGAGCGTTTCTTCAT 5052
Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGAC 125194
|| ||| | | |||||||| || | || || || || |||||||| || || |
Sbjct 5053 CTCTCACGTCCTTGCCTTCTTCGCTGCATCGGACGGCATTGTCAACGAGAACTTGGTCGA 5112
Query 125195 ACGATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252
|| ||| ||| ||| | || || |||| ||| ||||| ||||| ||||| ||
Sbjct 5113 GCGCTTCAGCTC-CGAGGTTCAGATCCCCGAGG-CTCGCTGCTTCTACGGCTTCCAGATT 5170
Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT 125312
||||| |||||| | ||||| || | ||||| |||| |||| ||||||| ||||
Sbjct 5171 ATGATGGAGAACATTCACTCCGAGACTTACTCGCTCTTGATCGACACGTACATTAGCGAG 5230
Query 125313 CC---GCAACGTAAACACATGCTCTTTAACGCAATCGAC-ACGGTGC-----------CG 125357
|| |||||| || || ||||| ||||| || ||| || || | |
Sbjct 5231 CCCAAGCAACGCAACTAC---CTCTTCAACGCCATTGACAACAGTACGTGGTCACATGCA 5287
Query 125358 TCT----------ATA------CGT-------------------AAAAAGGCTCAATGGG 125382
||| ||| ||| |||||||| | ||||
Sbjct 5288 TCTTGTAGTCAACATACTGACGCGTCCTAGTTCCCTGCATCAAGAAAAAGGCCGACTGGG 5347
Query 125383 TGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCG 125442
| || |||||| |||| | || || | | || | | ||| | || || || |
Sbjct 5348 CCCTCCGCTGGATCTGTGACAAGAACTCGACCTTTGCATCCCGTCTGATTGCCTTTGCTG 5407
Query 125443 CCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCG 125502
| || ||||| |||||||| ||| || ||| ||||||| |||||||||||||| |
Sbjct 5408 CTGTCGAGGGTATCTTCTTCAGCGGTTCCTTCGCGTCCATCTTCTGGCTCAAGAAGCGTG 5467
Query 125503 GACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACT 125562
| || ||||| || || || | |||||| | || || || ||||||||| | |||
Sbjct 5468 GCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACA 5527
Query 125563 GTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCC-CGAGTGCAGATCCAG-CG 125619
||||||||| || || || || || ||| |||| | | | | | || |
Sbjct 5528 CCGACTTTGCCTGCCTGCTCTTCTCTCA--CATC-AAGTCCAAGCCTTC-GCCCGAGACT 5583
Query 125620 ATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCG 125679
|| | ||| |||| | ||||| ||||| ||| || |||||||| || ||||
Sbjct 5584 GTGGAGAGG--ATCA------TCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTACCG 5635
Query 125680 AATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGT 125739
| | || || ||| | || | ||||||||| | || |||||| ||||||| ||||
Sbjct 5636 ACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGAGT 5695
Query 125740 TTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTACAACGCCAAGA 125796
|||| || || || || ||| | | ||||| ||||| | |||||| | | |
Sbjct 5696 TTGTTGCCGACCGCCTGCTG---GTGGCTCTTGGCAACAAGAAGTTCTACAACTCGACCA 5752
Query 125797 ATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
| ||||| || |||||| | ||| || || | || ||||||||||| |||||||||
Sbjct 5753 ACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAG 5811
>seq546
Length=57559
Score = 143 bits (158), Expect = 4e-29
Identities = 385/581 (66%), Gaps = 12/581 (2%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||| | | ||| ||||| | || |||||| || | ||||| || || | ||
Sbjct 43794 ACCAACGGTACCTCCAACGGCCTGATTCCCATGCTCCGAGTCTACAACAACACTG-CTCG 43736
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||||| || || ||||| || || || || ||| | ||| ||||| |||| |||||
Sbjct 43735 CTACGTCGACCAAGGTGGCAACAAGCGTCCTGGTGCTTTTGCCATCTACCTGGAGCCTTG 43676
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| ||||| || ||| |||| | ||||| ||| || || |||| ||
Sbjct 43675 GCACGCTGACGTCTTCCCCTTCCTCGACCTTCGCAAGAACCACGGAAAGGAGGAGGTCCG 43616
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT----CA 97041
|| | ||| | ||||| || | ||| | || ||| ||||||||||||| || ||
Sbjct 43615 CGCGCGCGACCTCTTTTACGCGTTGTGGATTCCCGATCTGTTCATGAAGCGTGTGGAGCA 43556
Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101
| |||||| | |||| || | ||||| || | | || ||||| |||| |
Sbjct 43555 A-AACGGTG---AATGGACTCTCTTTTGCCCTCACGAGGCCCCGGGTCTTGCCGACGTGT 43500
Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGA 97160
||||| ||||| |||| ||| | ||||| || ||||| || ||||
Sbjct 43499 ACGGCGACGAGTTCGAGGAGCTCTACGAGAGGTACGAAAGGGAAGGCCGTGGTCGCGAGA 43440
Query 97161 CGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220
| |||| || | | | |||||| | |||||| | ||||||| ||||| || | |
Sbjct 43439 C-AGTCCGCGCCCAAAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAAT 43381
Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280
|| | || |||||||||||| | || ||||| |||||||| || | ||||||
Sbjct 43380 CCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACC 43321
Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCA 97340
|| ||||||| || ||| || ||||| |||||| | |||| || ||| ||
Sbjct 43320 ATTCGCAGCTCCAACCTCTGCTGCGAGATTGTTGAGTACACGGCTCCTGATGAGGTTGCT 43261
Query 97341 GTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381
|||||| | |||| || || ||| || | ||||| ||
Sbjct 43260 GTTTGCAATTTGGCCTCTCTCGCTCTTCCTACCTTTGTTGA 43220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741046777995160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |