Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq868 84.2 2e-11 >seq868 Length=65722 Score = 84.2 bits (92), Expect = 2e-11 Identities = 189/276 (68%), Gaps = 20/276 (7%) Strand=Plus/Minus Query 99502 CGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTC-CGCACGGTGAGCGAGGT 99560 ||| |||||||| || | ||||||| ||| | || | ||||| || | |||| Sbjct 27111 CGCTCCCAGCCCTTGCCGCTGTGCGAGTT-GGCCTCGTGCGCGCGCACCGTCAAGCAGGT 27053 Query 99561 GTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAGCC---GTGCTGCGG 99614 |||||||||||||||||||||| ||||| ||| || ||||| ||| || | |||| Sbjct 27052 GTTGAGCAGCAGCACGCCGCGGTCGGCCCACGGCGTCAGCAGGCCGCCCTTGTTCGGCGG 26993 Query 99615 CCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGA-----GGCTG 99669 | | | | ||| ||| ||||| || || ||| ||||||| || ||| | Sbjct 26992 CGCCTCGAACGACGGGTAGTCCTTCTTCAGCGCAATGTACATGTTCTTGAGCGATGGCGG 26933 Query 99670 GGCGGGA-TCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCT 99728 |||||| |||| |||| ||| |||| |||||||| || || |||| | Sbjct 26932 TGCGGGAGTCGG-TGGCCG-----CACCGAGAAGCAGAGGCCGTGCGCTTGGTTGTGGTT 26879 Query 99729 GTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 |||||||||||| || || ||||| || | ||||| Sbjct 26878 GTGGTAGGGGTCTTGTCCGAGGATTACTGCTTTGAC 26843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440891809427160