Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_005261.2
Length=137821
Score E
Sequences producing significant alignments: (Bits) Value
seq868 84.2 2e-11
>seq868
Length=65722
Score = 84.2 bits (92), Expect = 2e-11
Identities = 189/276 (68%), Gaps = 20/276 (7%)
Strand=Plus/Minus
Query 99502 CGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTC-CGCACGGTGAGCGAGGT 99560
||| |||||||| || | ||||||| ||| | || | ||||| || | ||||
Sbjct 27111 CGCTCCCAGCCCTTGCCGCTGTGCGAGTT-GGCCTCGTGCGCGCGCACCGTCAAGCAGGT 27053
Query 99561 GTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAGCC---GTGCTGCGG 99614
|||||||||||||||||||||| ||||| ||| || ||||| ||| || | ||||
Sbjct 27052 GTTGAGCAGCAGCACGCCGCGGTCGGCCCACGGCGTCAGCAGGCCGCCCTTGTTCGGCGG 26993
Query 99615 CCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGA-----GGCTG 99669
| | | | ||| ||| ||||| || || ||| ||||||| || ||| |
Sbjct 26992 CGCCTCGAACGACGGGTAGTCCTTCTTCAGCGCAATGTACATGTTCTTGAGCGATGGCGG 26933
Query 99670 GGCGGGA-TCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCT 99728
|||||| |||| |||| ||| |||| |||||||| || || |||| |
Sbjct 26932 TGCGGGAGTCGG-TGGCCG-----CACCGAGAAGCAGAGGCCGTGCGCTTGGTTGTGGTT 26879
Query 99729 GTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764
|||||||||||| || || ||||| || | |||||
Sbjct 26878 GTGGTAGGGGTCTTGTCCGAGGATTACTGCTTTGAC 26843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440891809427160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |