Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq923 95.1 3e-14
seq731 89.7 1e-12
>seq923
Length=2568
Score = 95.1 bits (104), Expect = 3e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || ||||| || | || || || || || || || || ||
Sbjct 298 GTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCATCCTCGAGCTGCTTGCCT 239
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| || ||||| || || || || || ||||||||||| | ||
Sbjct 238 GCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 179
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||||| || ||| ||||| || || || ||||| || || || ||
Sbjct 178 ACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGTCTTTCCGGTCAGGGTC 119
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 118 TTGACGAAGATCTGCAT 102
>seq731
Length=88763
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || | |||||| || || || || |||
Sbjct 88339 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCAAGCTGCTTGCCA 88280
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || || || || ||||||||||| | ||
Sbjct 88279 GCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTC 88220
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | ||| ||| | || ||||| || || || ||||| || || | |||
Sbjct 88219 ACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGACTGT 88161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151378617176428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |