Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq250 84.2 2e-11
>seq250
Length=11159
Score = 84.2 bits (92), Expect = 2e-11
Identities = 118/162 (73%), Gaps = 4/162 (2%)
Strand=Plus/Minus
Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGA-AG-TTGAACA 5651
||||| || || ||||| || | ||| ||||| || || | || |||| || ||| |
Sbjct 9613 AGCTGTGCGATGCGGTCACCAGGCTTGACCTCAAAGTCCTCGT--CCGAGAGATTGGCGA 9556
Query 5652 GCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGA 5711
| | || || |||| ||||||||||||||| || || || || ||| |||||||
Sbjct 9555 GGAGAACACCAACGTCGCCGCGGTAGTCGGCATCAATGACACCAGCGAGAGTGTCGATGC 9496
Query 5712 AGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
|||||| | ||||| || ||||| ||||| | ||||||||
Sbjct 9495 CGTGCTTAGCTGCCAGTCCAGAGCGAGGAGCAATGCGGCCGT 9454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430047371432792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |