Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq838 86.0 4e-12
>seq838
Length=49465
Score = 86.0 bits (94), Expect = 4e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 25776 GTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCC 25835
|||| ||||||| || || |||| || ||| ||||| ||||| || ||||| ||||| ||
Sbjct 13233 GTCCTTGTACTCGGCGCCAAAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGGTCGCC 13174
Query 25836 ATCTTCCCTGTGCTCAAAGCCCCTCT-TATCCAAAAAGTCTCTGGAACCATTGGCGTCCC 25894
||||| | ||| || || || | | |||| ||| |||| || || ||| ||||||
Sbjct 13173 CTCTTCGCGGTG-TCCCAGTCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCCGTCCC 13115
Query 25895 AGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACA 25954
|||| || | || || || ||| || ||| ||| || | ||||||||
Sbjct 13114 AGATTTTGATTCCTGCATCTGACAGCGGCTTCGAGGACGTGCTGCCCGAAATGAACCACA 13055
Query 25955 GCAGCTCCGCCGTGACGGC 25973
||||||| || |||||||
Sbjct 13054 GCAGCTCGGCAATGACGGC 13036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340132040982393
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |