Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 105 1e-18
seq1100 96.9 5e-16
>seq1054
Length=15539
Score = 105 bits (116), Expect = 1e-18
Identities = 86/102 (84%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || |
Sbjct 13411 CGCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCTGCCA 13469
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||||||||| ||||| ||||| || ||||||||| ||||||
Sbjct 13470 TCCGTCGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATCTCTG 13511
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| || | ||| | ||| |||||| ||| ||| |||| ||| |
Sbjct 13564 TGATCTACGAAGAGACCCGCGGTGTCCTCAAGTCGTTCCTCGAGAGCGTCATCCGTGACG 13623
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||||||| | || | ||||| |
Sbjct 13624 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACG 13683
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || ||||| | | || ||||| ||| |||||
Sbjct 13684 CCCTCAAGCGCCAGGGCCGCACCCTCTACGGTTTCGGAGGTTAA 13727
>seq1100
Length=50903
Score = 96.9 bits (106), Expect = 5e-16
Identities = 73/85 (86%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | || || |||||||| || ||||||||||| || ||||||||||| |||||
Sbjct 48629 AGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCCATCCGTCGTCTTGCTCGC 48687
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||||||| ||||||||| ||||||
Sbjct 48688 CGTGGTGGTGTCAAGCGTATCTCTG 48712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073973914313
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |