Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq546 360 5e-94 >seq546 Length=57559 Score = 360 bits (398), Expect = 5e-94 Identities = 1178/1806 (65%), Gaps = 66/1806 (4%) Strand=Plus/Minus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTG 363445 ||||||| || | ||||| |||||| || ||| | ||| |||||||| | ||| Sbjct 44155 ATATTTT-GGTTTCAAGACACTGGAGAGGTCATACTTGCTTCGCATCAATGGCAAAGTTG 44097 Query 363446 TTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT- 363504 ||| | |||||||| ||| | |||||||||||| | |||||||| || || | Sbjct 44096 CCGAAAGACCGCAGCACATGATCATGCGTGTTGCTGTCGGTATCCACGGCGAAGACATAA 44037 Query 363505 -GA-TGCCGCGATTGAAACATATAAGCTTCT-------AAGTGCTCGTGTATTCACGCAC 363555 || |||| | ||||| || ||| | | ||||||| | || || Sbjct 44036 CGAGTGCCC---TCGAAACGTACAAGTTGATGTCGGAAAAGTGCT-------TTACTCAT 43987 Query 363556 GCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT 363615 ||| | || || ||| ||| ||||| || | || || ||| | | || ||||| | Sbjct 43986 GCCTCCCCCACCTTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTG 43927 Query 363616 CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTT 363675 | | |||||||| || |||||||||||| | ||||| || |||| ||||||| | Sbjct 43926 ATCGACATGAAGGAGGACAGCATCGAGGGTATTTACGACACTCTCAAGACTTGTGCTATG 43867 Query 363676 ATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACA 363733 |||||||||| || || ||||||||| | | || ||||| | ||||| | |||| | Sbjct 43866 ATTTCCAAGACGGCCGGTGGAATTGGTCTCAACG-TCCACCGTATTCGTTCCACAGG-CT 43809 Query 363734 GTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTG 363793 |||||| ||||| || ||| || || ||| |||||||||| || || | Sbjct 43808 CCTACATTGCTGGCACCAACGGTACCTCCAACGGCCTGATTCCCATGCTCCGAGTCTACA 43749 Query 363794 ACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGT 363853 |||| ||||| | ||||||||||| ||||| ||||| || || ||||| || | Sbjct 43748 ACAACACTGCTCGCTACGTCGACCAAGGTGGCAACAAGCGTCCTGGTGCTTTTGCCATCT 43689 Query 363854 ATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAA 363913 | || |||||| || || || | || || || || || || || ||| |||| Sbjct 43688 ACCTGGAGCCTTGGCACGCTGACGTCTTCCCCTTCCTCGACCTTCGCAAGAACCACGGAA 43629 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 | ||||| | || || || || || || || || | ||| || | || | || |||| Sbjct 43628 AGGAGGAGGTCCGCGCGCGCGACCTCTTTTACGCGTTGTGGATTCCCGATCTGTTCATGA 43569 Query 363974 AGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030 |||| |||||| | ||| |||| || | ||||||||||| ||||| || |||| Sbjct 43568 AGCGTGTGGAGCAAAACGGT--GAAT-GGACTCTCTTTTGCCCTCACGAGGCCCCGGGTC 43512 Query 364031 TTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAA 364090 || |||| || | || ||||| | | | || ||||| | ||| ||| ||| || Sbjct 43511 TTGCCGACGTGTACGGCGACGAGTTCGAGGAGCTCTACGAGAGGTACGAAAGGGAAGGCC 43452 Query 364091 AGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTG 364150 | ||| ||||| | | ||| || ||||| |||| ||||||| | || | |||| | Sbjct 43451 GTGGTCGCGAGACAGTCCGCGCCCAAAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCG 43392 Query 364151 AGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGC 364210 |||| || | |||| |||| | ||||| ||| | |||||||||||| ||||||| || Sbjct 43391 AGACCGGCAATCCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGA 43332 Query 364211 ACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCC 364269 |||| || || |||| |||| |||||| || ||||||| |||| ||||| ||||| Sbjct 43331 ACCTCGGCACCATTC-GCAGCTCCAACCTCTGCTGCGAGATTGTTGAGTACACGGCTCCT 43273 Query 364270 GACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AA 364321 || ||| ||| || || || | || || |||| ||||| | ||||| | Sbjct 43272 GATGAGGTTGCTGTTTGCAATTTGGCCTCTCTCGCTCTTCCTACCTTTGTTGATGTCCAG 43213 Query 364322 AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTG-CA-- 364378 || | || | |||| | || | || | | || | || | || | || Sbjct 43212 AACAACGT--CTATGACTTCAAGAAGCTGCACAATGT----TGTCCAAGTCCTCGTCAAG 43159 Query 364379 ATCTCG-ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAA 364436 | || | ||||| | ||||||| || | || || |||| || ||| || | | || Sbjct 43158 AACTTGAACAAGATCATCGACATCAACCACTACCCTGTTCCCGAGGCCAGAAAGAGC-AA 43100 Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496 ||||| |||||||| |||| | | ||||| | ||||| ||||| | || | || Sbjct 43099 CATGCGCCATCGCCCCATTGCTGTCGGTGTCAACGGCCTTGCTGATGCATTCCTCGCTCT 43040 Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 ||| | || || ||||| || || | || || | ||||||| ||||| || Sbjct 43039 TCGCATGCCTTTCGACTCGCCCGAGGCCAGGCAACTCAACATACAGATCTTCGAAACCAT 42980 Query 364557 GTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTAC 364616 || | ||| | || ||||| || |||| || | || || ||| || Sbjct 42979 CTACCACG-CGCTCTCACGGCTTCCGTCGAGCTGGCCAAGAAGAACGGTGCCTACGAGAC 42921 Query 364617 TTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCC 364676 ||| ||||| || ||| | || || || | || |||| || | ||||| || || Sbjct 42920 TTACGAGGGATCGCCTGTCTCTCAAGGTATCTTGCAGTACGACATGTGGAACAAGACCCC 42861 Query 364677 ATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCG--- 364733 | | | |||| ||||||| | || || | || |||| ||| || Sbjct 42860 TACGGATCTATGGGACTGGGAGAGCCTGAAGTCAGAGATTGCTCAGCACGGTGTGCGGAA 42801 Query 364734 CAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAA 364793 || || |||||| || || ||||| || || || || ||||| ||||| ||| Sbjct 42800 CAGCTTGCTCGTT---GCCCCTATGCCGACTGCCTCGACCAGCCAGATTCTCGGCTTCAA 42744 Query 364794 CGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATT 364853 ||| || ||||| || | || ||| | || || ||||| || || |||| || || Sbjct 42743 CGAATGTTTCGAGCCTTACACCTCCAACATCTACTCGCGCCGTGTCCTCGCCGGTGAGTT 42684 Query 364854 TCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAG 364913 | ||| || || | || ||||||| || ||| || ||||| |||| Sbjct 42683 CCAGGTCGTCAACCCCTGGCTTCTCAAGGACCTCGTCGAGATGGGCTTGTGGTCAGACAA 42624 Query 364914 CATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA 364973 |||||||||| |||||| ||| ||||| ||| | ||| | ||||| |||| || Sbjct 42623 CATGAAGAACCGTATCATTGCCTGCAATGGCTCTATCCAGGATATTCCCAACATTCCCGA 42564 Query 364974 AGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---A 365030 || | ||| || | ||||| ||||| ||||| ||||| ||| || ||||| | Sbjct 42563 TGACATCAAGGCTCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCAC---CATTGTGCA 42507 Query 365031 TATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGAC 365090 ||||| || || ||||| ||||| ||| ||| ||||||| | ||| | ||||| Sbjct 42506 GATGGCTGCTGACCGCGGCGCTTTCATCGACCAGTCCCAGTCGCTGAACATCCACATGAA 42447 Query 365091 TCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAA 365150 |||| || | |||| | || |||||||| || ||| ||||| ||||| || Sbjct 42446 GGAGCCTACTATGGGCAAGATCACCTCCATGCACTTTGCCGGCTGGAAGCTTGGTCTCAA 42387 Query 365151 GACAGG 365156 ||| || Sbjct 42386 GACTGG 42381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303331206348662