Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq496 161 9e-35 seq923 129 6e-25 seq731 127 2e-24 seq670 102 8e-17 seq363 102 8e-17 >seq496 Length=30664 Score = 161 bits (178), Expect = 9e-35 Identities = 305/444 (69%), Gaps = 11/444 (2%) Strand=Plus/Plus Query 46156 CGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATC 46215 ||| || | |||||||| ||| ||||| |||| || || || || ||||| Sbjct 5389 CGTCTGATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTCGCGTCCATC 5448 Query 46216 TTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCG 46275 || | |||| | ||| | ||||| ||||| || || ||||||||| || || Sbjct 5449 TTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCC 5508 Query 46276 CGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT---CTACTATAACACTCGCGTGCAC 46332 || ||||||||| |||| || |||||||| || || || || | ||| || || || Sbjct 5509 CGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCACA-TCAAGTCCA- 5566 Query 46333 GACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAG 46392 ||| | ||||||| || ||| ||| || ||| ||||| || | || ||| | Sbjct 5567 ----AGCCTTCGCCCGAGACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAA 5622 Query 46393 GAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC-ACAGTCAATGTG 46451 ||||| |||| | ||| || |||| |||||||| ||||||||||| || || ||||| Sbjct 5623 GAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTC-ATGTG 5681 Query 46452 CGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTT 46511 | | |||||||||||||| || ||||| ||||| ||| ||| | | |||| | Sbjct 5682 CCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCTCTTGGCAACAAGAAGTTCTA 5741 Query 46512 TCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTT 46571 || || ||| || || || || ||| | ||||| || || | ||||| || || || Sbjct 5742 CAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTT 5801 Query 46572 TTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| ||||| || || || || Sbjct 5802 CTTCGAGAAGCGTGTTGGTGACTA 5825 >seq923 Length=2568 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| |||||||| || |||||||| || | Sbjct 328 CCACCACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 269 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | || | ||||| ||||||||||||||| |||| || ||||||||||| || || Sbjct 268 AACGTCCTGCCA-TCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGG 210 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || ||| ||||| | || | ||||| | || |||| Sbjct 209 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGAC 150 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| |||||||| Sbjct 149 CTCGAGCGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102 >seq731 Length=88763 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || | || | || |||||||| || |||||||| ||| Sbjct 88653 CCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 88594 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||||||||| Sbjct 88593 AGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 88534 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | ||||||| Sbjct 88533 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACT 88474 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || ||||| Sbjct 88473 TCGAGGGTGATGGTCTTGCCGGT 88451 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||| | |||||| |||||| ||||||||||| Sbjct 88339 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCAAGCTGCTTGCCA 88280 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||||||||||||||| || || || || ||||| || || ||| Sbjct 88279 GCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTC 88220 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | || |||| |||||||| || | ||| | ||| || ||||| Sbjct 88219 ACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 88167 >seq670 Length=49272 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | |||||| |||||| ||||||||||| ||| ||| Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 38528 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 38587 Query 131225 A 131225 | Sbjct 38588 A 38588 >seq363 Length=34683 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | || | |||||||||||| || |||||||| || Sbjct 5293 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 5352 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 5353 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGA 5412 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 5413 ATGCCCTCCTTGTC 5426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472004887885440