Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq496 161 9e-35
seq923 129 6e-25
seq731 127 2e-24
seq670 102 8e-17
seq363 102 8e-17
>seq496
Length=30664
Score = 161 bits (178), Expect = 9e-35
Identities = 305/444 (69%), Gaps = 11/444 (2%)
Strand=Plus/Plus
Query 46156 CGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATC 46215
||| || | |||||||| ||| ||||| |||| || || || || |||||
Sbjct 5389 CGTCTGATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTCGCGTCCATC 5448
Query 46216 TTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCG 46275
|| | |||| | ||| | ||||| ||||| || || ||||||||| || ||
Sbjct 5449 TTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCC 5508
Query 46276 CGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT---CTACTATAACACTCGCGTGCAC 46332
|| ||||||||| |||| || |||||||| || || || || | ||| || || ||
Sbjct 5509 CGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCACA-TCAAGTCCA- 5566
Query 46333 GACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAG 46392
||| | ||||||| || ||| ||| || ||| ||||| || | || ||| |
Sbjct 5567 ----AGCCTTCGCCCGAGACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAA 5622
Query 46393 GAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC-ACAGTCAATGTG 46451
||||| |||| | ||| || |||| |||||||| ||||||||||| || || |||||
Sbjct 5623 GAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTC-ATGTG 5681
Query 46452 CGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTT 46511
| | |||||||||||||| || ||||| ||||| ||| ||| | | |||| |
Sbjct 5682 CCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCTCTTGGCAACAAGAAGTTCTA 5741
Query 46512 TCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTT 46571
|| || ||| || || || || ||| | ||||| || || | ||||| || || ||
Sbjct 5742 CAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTT 5801
Query 46572 TTTCGAAAAGCGCGTCGGCGAGTA 46595
||||| ||||| || || || ||
Sbjct 5802 CTTCGAGAAGCGTGTTGGTGACTA 5825
>seq923
Length=2568
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| ||||| | ||| |||||||| || |||||||| || |
Sbjct 328 CCACCACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 269
Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || | || | ||||| ||||||||||||||| |||| || ||||||||||| || ||
Sbjct 268 AACGTCCTGCCA-TCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGG 210
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || ||| ||||| | || | ||||| | || ||||
Sbjct 209 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGAC 150
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || ||||| || || || ||||| ||||||||
Sbjct 149 CTCGAGCGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
>seq731
Length=88763
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| || | || | || |||||||| || |||||||| |||
Sbjct 88653 CCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 88594
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| | ||||||||||||||||||
Sbjct 88593 AGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 88534
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | || || | |||||||
Sbjct 88533 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACT 88474
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || |||||
Sbjct 88473 TCGAGGGTGATGGTCTTGCCGGT 88451
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| || |||||||| ||| | |||||| |||||| |||||||||||
Sbjct 88339 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCAAGCTGCTTGCCA 88280
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| |||| | ||||||||||||||| || || || || ||||| || || |||
Sbjct 88279 GCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTC 88220
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210
| | || | || |||| |||||||| || | ||| | ||| || |||||
Sbjct 88219 ACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 88167
>seq670
Length=49272
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | |||||| |||||| ||||||||||| ||| |||
Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| |||| ||| | ||| || || || || || || ||||
Sbjct 38528 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 38587
Query 131225 A 131225
|
Sbjct 38588 A 38588
>seq363
Length=34683
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | |||||||||||| || |||||||| ||
Sbjct 5293 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 5352
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| || ||||||||||| || ||
Sbjct 5353 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGA 5412
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 5413 ATGCCCTCCTTGTC 5426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472004887885440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |