Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq731 109 5e-19
seq670 93.3 4e-14
seq923 89.7 4e-13
seq363 87.8 2e-12
>seq731
Length=88763
Score = 109 bits (120), Expect = 5e-19
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| || || || |||| ||| | ||| || | ||
Sbjct 88167 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGTCC 88226
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| ||||| || || || || |||||||| || || |||||
Sbjct 88227 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCTGGCAAG 88286
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | ||||| |||||| ||||||| |||||||| || || || || ||
Sbjct 88287 CAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGAC 88339
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || ||||| || | | || ||| | ||| | ||||
Sbjct 88451 ACCGGCAAGACCATCACCCTCGAAGTCGAGTCTTCGGACACCATCGACAACGTCAAGTCG 88510
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || |||||||||||||| || || || || || || || || || || || |||||
Sbjct 88511 AAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAG 88570
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | ||||| |||||| | ||||| |||||||| || || || ||||| | ||
Sbjct 88571 CAGCTTGAGGACGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 88630
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
| || |||| |||| || |||
Sbjct 88631 CTCGTCCTGCGTCTGCGTGGTGGT 88654
>seq670
Length=49272
Score = 93.3 bits (102), Expect = 4e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || || || || || | || ||| | ||| || ||||
Sbjct 38573 ACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCC 38514
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| ||||| || || || || || || || || ||||||||
Sbjct 38513 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCTTCGCCGGCAAG 38454
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||| | ||||| ||||||| ||||||| |||||||| || ||
Sbjct 38453 CAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 38410
>seq923
Length=2568
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || ||| |||| || || || ||| | |
Sbjct 102 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 161
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| | |||| || ||||| ||||||||||| || || || || ||
Sbjct 162 GATACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 221
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || ||||| ||| | |||||| | | || | || || ||||||
Sbjct 222 CAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAAC 281
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || || ||| | ||||| ||
Sbjct 282 ATCCAGAAGGAGTCTACCCTGCATTTGGT 310
>seq363
Length=34683
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||| ||||| ||||| || || || | || || |||||||| ||| | ||
Sbjct 5427 AGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGA 5368
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430
||| ||||||| |||| || |||||||| || || || || ||| | || | || |
Sbjct 5367 GGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTCCT 5308
Query 22431 GCGATTGCGCGGAGGT 22446
||| |||| || |||
Sbjct 5307 GCGCCTGCGTGGTGGT 5292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419721140201665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |