Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq496 102 2e-16
seq506 100 6e-16
>seq496
Length=30664
Score = 102 bits (112), Expect = 2e-16
Identities = 269/404 (67%), Gaps = 10/404 (2%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || || || ||||||||||||||||||||| ||
Sbjct 5807 TCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTC 5748
Query 251623 GCATTGT---ACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679
| |||| ||| |||| | |||||| || || | | |||||| || ||||||||
Sbjct 5747 GAGTTGTAGAACTTCTTG---TTGCCAAGAGCCACCAGCAGGCGGTCGGCAACAAACTCG 5691
Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACA 251738
| ||||| | ||| || || ||||||||| | || |||| |||| || ||
Sbjct 5690 ATGTACTGGCACATGAGGGTAGCGTTCATGCCGAGCAGGGCGAC-GGGAAGAGCGTCGGT 5632
Query 251739 GATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGA 251798
| ||| || | || | | || ||||| | || || ||| | | ||
Sbjct 5631 AAGGAACTCTTGCTCCATCTCGACGGCCTCGGTGATGATCCTCTCCACAGTCTCGGGCGA 5572
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858
||||| || | | ||| | || || | |||| | ||||| ||||||||
Sbjct 5571 AGGCTTGGACTTGATGTGAGAGAAGAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTC 5512
Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918
|| ||||| ||||||||| | ||||||||||||| ||||| ||| |||||||
Sbjct 5511 ACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATCAGGCCACGCTTCTTGAGCCA 5452
Query 251919 GAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||||| | ||| ||||| || ||| | | ||||||||||
Sbjct 5451 GAAGATGGACGC-GAAGGAACCGCTGAAGAAGATACCCTCGACA 5409
>seq506
Length=84062
Score = 100 bits (110), Expect = 6e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || || | |||||||| ||||| ||||| || ||||| ||||| |||| |||||
Sbjct 38126 CTCCCGTATCGCCGTCATTGGTCCCAACGGTGCCGGAAAGTCCACCCTGGTCAATGTCCT 38185
Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
|||||| ||| | |||| | || || | |||| ||||| || || ||
Sbjct 38186 GACTGGTGAGCTCATTCCCACCGCCGGTGAGGTCTACCAGCACGAGAACATCCGTATCGC 38245
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| |||||| || ||||||| |||| |||||| |
Sbjct 38246 CTACATCAAGCAGCACGCTTTCGCCCACATTGACCACCACCTCGACAAGACTCCCTCGGA 38305
Query 280340 ATACATTCAGTGGCG 280354
||||||||||||||
Sbjct 38306 GTACATTCAGTGGCG 38320
Score = 91.5 bits (100), Expect = 3e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||| || || |||| ||| | || || |||| ||||||||||| |||
Sbjct 37311 GGTGAGGACCTCTGCAACTGCACCTTCAACTTGGCCTACGGTGCCAAGATTCTGCTCAAC 37370
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| | | ||||||||| | || || ||||| ||||| |||| || |
Sbjct 37371 CAGACCCATCTCCGCCTGAAGCGTGGCCAGCGCTACGGTCTGCTCGGTGCCAACGGTTCC 37430
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| |||| ||| || ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 37431 GGAAAGACCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 37489
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
||||| | ||| || || || ||||||||| | |||||
Sbjct 37490 GAACGAGGTCAAGACTGTCTACGTCGAGCACGACCTTGACTC 37531
Score = 84.2 bits (92), Expect = 4e-11
Identities = 92/120 (77%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| ||||| || ||||| ||||| || ||| ||||| | ||| | | || ||
Sbjct 38715 CACTCGCGCATGCGTGGTCTGTCTGGTGGTCAGCGTGTCAAGGTCGTCCTTGCCGCTTGC 38774
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| |||||| | |||||| ||||||| ||||||||||| |||||||| || ||||| ||
Sbjct 38775 TC-GTGGCAGCGTCCTCACTTGATCGTCCTCGACGAGCCCACCAACTACCTCGACCGTGA 38833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027819140157781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |