Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq923 123 6e-23 seq670 100 7e-16 seq496 84.2 5e-11 >seq923 Length=2568 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | | ||| | || || || | || || ||||||||| Sbjct 292 TCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCATCCTCGAGCTGCTTGCCTGCGAAG 233 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||| || | ||||| || || || ||||| || |||| || ||||| Sbjct 232 ATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG 173 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||||| || ||||||||||||||||| |||||||| ||||||||| Sbjct 172 TCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGTCTTTCCGGTCAGGGTCTTGACG 113 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 112 AAGATCTGCAT 102 >seq670 Length=49272 Score = 100 bits (110), Expect = 7e-16 Identities = 132/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| ||||| || | || || || ||||||||| Sbjct 38410 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 38469 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || || ||| || || || || |||||||| || | || || || Sbjct 38470 AGGCGCTGCTG---GTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 38526 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || ||||| ||||||||| Sbjct 38527 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACG 38586 Query 288463 AA 288464 || Sbjct 38587 AA 38588 >seq496 Length=30664 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176 |||||||| || |||||| | || | || |||| ||||| || |||||| Sbjct 5621 AAGAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGT 5680 Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGT 269236 || || ||||| || || || || || | | ||| || || | |||| | | Sbjct 5681 GCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCTCTTGGCAACAAGAAGTTCT 5740 Query 269237 ACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACT 269296 |||| |||| || ||||||| ||| ||||| ||||||||| | || ||||| |||| Sbjct 5741 ACAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACT 5800 Query 269297 TCTTCGAAAAGCGTGTCAGCGACTATCAA 269325 ||||||| |||||||| | ||||| ||| Sbjct 5801 TCTTCGAGAAGCGTGTTGGTGACTACCAA 5829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179634131694198