Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq546 279 5e-70 >seq546 Length=57559 Score = 279 bits (308), Expect = 5e-70 Identities = 1075/1671 (64%), Gaps = 37/1671 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | || |||| ||||| || ||||||| ||| ||| | || || ||||| Sbjct 44163 AACTACCAATATTTTGGTTTCAAGACACTGGAGAGGTCATACTTGCTTCGCATCAATGGC 44104 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| |||| ||||||| || || | ||||| || || |||| || |||||| | Sbjct 44103 AAAGTTGCCGAAAGACCGCAGCACATGATCATGCGTGTTGCTGTCGGTATCCACGGCGAA 44044 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||||| ||| || | | | || ||| ||| ||| | | ||| |||| | Sbjct 44043 GACATAACGAGTGCCCTCGAAACGTACAAGTTGATGTCGGAAAAGTGCTTTACTCATG-C 43985 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | |||| ||| |||||||||| || ||||| ||| ||| | | || || ||| |||| Sbjct 43984 CTCCCCCACCTTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGAT 43925 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| |||| || |||| ||||| |||||| ||||| | | Sbjct 43924 CGAC-ATGAAGGAGGACAGCATCGAGGGTATTTACGACACTCTCAAGACTTGTGCTATGA 43866 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTC 94070 | || || || || ||||| || ||| |||||| |||| ||| ||| || || Sbjct 43865 TTTCCAAGACGGCCGGTGGAATTGGTCTCAACGTCCAC--CGTATTCGTTCCACAGGCTC 43808 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| || ||||| || |||||||||||||| | || |||||||| |||| ||| Sbjct 43807 CTACATTGCTGGCACCAACGGTACCTCCAACGGCCTGATTCCCATGCTCCGAGTCTACAA 43748 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || |||||||| ||||| ||||| | | | ||| |||| || |||| Sbjct 43747 CAACACTGCTCGCTACGTCGACCAAGGTGGCAACAAGCGTCCTGGTGCTTTTGCCATCTA 43688 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 || ||||| |||||||| ||||| | ||| ||||||| || ||||||||||| || Sbjct 43687 CCTGGAGCCTTGGCACGCTGACGTCTTCCCCTTCCTCGACCTTCGCAAGAACCACGGAAA 43628 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | || | |||||||| ||||| | ||| | || || || || ||||| Sbjct 43627 GGAGGAGGTCCGCGCGCGCGACCTCTTTTACGCGTTGTGGATTCCCGATCTGTTCATGAA 43568 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || ||| ||||| | |||| ||| ||||| || | || || || || | Sbjct 43567 GCGTGTGGAGCAAAACGGTGAATGGACTCTCTTTTGCCCTCACGAGGCCCCGGGTCTTGC 43508 Query 94371 CGACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 |||||| | || || | || || || | || | | |||||| | | ||| | Sbjct 43507 CGACGTGTACGGCGACGAG-TTCGAGGAGCTCTACGAGAGGTACGAAAGGGAAGGCCGTG 43449 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | || | || ||||||||| || ||| | || | ||| |||| Sbjct 43448 GTCGCGAGACAGTCCGCGCCCAAAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGA 43389 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || | |||| || | | |||||| || |||| |||| ||||||| || ||| Sbjct 43388 CCGGCAATCCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACC 43329 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 |||| || ||||| || || ||| ||||||||| ||||| || |||| || | Sbjct 43328 TCGGCACCATTCGCAGCTCCAACCTCTGCTGCGAGATTGTTGAGTACACGGCTCCTGATG 43269 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA-- 94667 || ||||||| || || ||| ||| || || | || || || |||| | | Sbjct 43268 AGGTTGCTGTTTGCAATTTGGCCTCTCTCGCTCTTCCTACCTTTGT---TGATGTCCAGA 43212 Query 94668 --CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725 ||||||| |||| | ||| | | |||| | || | ||| Sbjct 43211 ACAACGTCTATGACTTC-AAGAAGCTGCACAATGTTGTCCAAGTC---------CTCGTC 43162 Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 |||| |||||| | | ||||||| ||| |||||| || || ||||| || Sbjct 43161 AAGAACTTGAACAAGATCATCGACATCAACCACTACCCTGTTCCCGAGGCCAGAAAGAGC 43102 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| || ||||| ||||| | |||| ||| | || | || || || | | Sbjct 43101 AACATGCGCCATCGCCCCATTGCTGTCGGTGTCAACGGCCTTGCTGATGCATTCCTCGCT 43042 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 | || |||| | |||||| ||| || | | || | | || ||||||| | Sbjct 43041 CTTCGCATGCCTTTCGACTCGCCCGAGGCCAGGCAACTCAACATACAGATCTTCGAAACC 42982 Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965 || || || | || | | |||||| | |||||| | |||| | | || Sbjct 42981 ATCTACCAC-GCGCTCTCACGGCTTCCGTCGAGCTGGCCAAGAAGAACGGTG---CCTAC 42926 Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025 || | | | |||||||| | || || || || |||| |||| | ||| | Sbjct 42925 GAGACTTACGAGGGATCGCCTGTCTCTCAAGGTATCTTGCAGTACGACATGTGGAACAAG 42866 Query 95026 AAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 | || ||| ||| | |||||||| ||| || | || || | |||||||| Sbjct 42865 ACCCCTACGGATCTATGGGACTGGGAGAGC-CTGAAGTCAGAGATTGCTCAGCACGGTGT 42807 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 | ||| |||| || ||||| ||||| || ||||| || ||||| || ||| Sbjct 42806 GCGGAACAGCTTGCTCGTTGCCCCTATGCCGACTGCCTCGACCAGCCAGATTCTCGGCTT 42747 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||| | ||||| || | |||||||||| | ||| | || || |||||||| || Sbjct 42746 CAACGAATGTTTCGAGCCTTACACCTCCAACATCTACTCGCGCCGTGTCCTCGCCGGTGA 42687 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTGGGGT 95262 |||| ||| ||||| || || |||||| |||| |||| ||||| Sbjct 42686 GTTCCAGGTCGTCAACCCCTGGCTTCTCAAGGACCT--CGTCGAGATGGGCTTGTGGTCA 42629 Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATA 95322 ||||| | ||||||| | | | ||| ||||| ||||| | || || | || Sbjct 42628 GACAACATGAAGAACCGTATCATTGCCTGCAATGGCTCTATCCAGGATATTCCCAACATT 42569 Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || || ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct 42568 CCCGATGACATCAAGGCTCTCTACAAGACCGTCTGGGAGATTTCGCAGCGC 42518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494714907202360