Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq546 194 2e-44 seq496 147 2e-30 >seq546 Length=57559 Score = 194 bits (214), Expect = 2e-44 Identities = 1055/1657 (64%), Gaps = 40/1657 (2%) Strand=Plus/Plus Query 152822 CGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCT---CAATCATGCGTTT 152878 ||| ||| ||| || ||||||||| ||||| || ||||||| |||| |||| | Sbjct 42464 CGACTGGGACTGGTCGATGAAAGCGCCGCGGTCAGCAGCCATCTGCACAATGGTGCGCTG 42523 Query 152879 TGCCTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAAT 152938 | ||||||||| |||| ||||| | | || | | ||| || || ||| Sbjct 42524 CGAA---ATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGGAAT 42580 Query 152939 GTTCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGT-ATTTCGGGCGTGTACACGT 152997 | ||| |||||||| ||| |||| ||| || ||| | || | | | ||| | Sbjct 42581 ATCCTGGATAGAGCCATTGCAGGCAATGATA-CGGTTCTTCATGTTGTCTGACCACAAGC 42639 Query 152998 TCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACA 153057 || | | |||||| | || | | ||||||| || || ||||| || || | | Sbjct 42640 CCATCTCGACGAGGTCCTTGAGAAGCCAGGGGTTGACGACCTGGAACTCACCGGCGAGGA 42699 Query 153058 CTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTT 153117 | || | | | || | ||| ||| |||| || || ||||||| ||| || || | Sbjct 42700 CACGGCGCGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCGAGAATCT 42759 Query 153118 GAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTC 153177 | || | || |||||||| || || | ||| ||||||| |||||| Sbjct 42760 GGCTGGTCGAGGCAGTCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAG 42819 Query 153178 GAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGT 153237 ||| || ||||| || ||| ||||| || ||| || ||| ||||||||||| Sbjct 42820 CAATCTCTGACTTCAGGCTCTCCCAGTCCCATAGATCCGTAGGGGTCTTGTTCCACATGT 42879 Query 153238 CGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGC 153297 ||||||| || | ||| || | | || || | | || |||| |||| Sbjct 42880 CGTACTGCAAGATACCTTGAGAGACAGGCGATCCCTCGTAAGTCTCGTAGGCACCGTTCT 42939 Query 153298 GTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTT 153357 | |||||| ||| | |||| ||| |||| | ||| ||||||||| ||| ||| Sbjct 42940 TCTTGGCCAGCTCGACGGAAGCCGTGAGAGCGCG-TGGTAGATGGTTTCGAAGATCTGTA 42998 Query 153358 TATTGAGAACGGCC--GCTTCTTCGCTCTCGTACGGCATGCGCAGCAGC-ACAAAGGCGT 153414 | ||||| ||| || || ||| | |||||||| || ||| | || || | Sbjct 42999 TGTTGAGTT--GCCTGGCCTCGGGCGAGTCGAAAGGCATGCGAAG-AGCGAGGAATGCAT 43055 Query 153415 CGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGC 153474 | || || || | || |||||| | ||||| ||||| | |||||| || || | Sbjct 43056 CAGCAAGGCCGTTGACACCGACAGCAATGGGGCGATGGCGCATGTTGCTCTTTCTGGC-C 43114 Query 153475 TCGCTATG-GGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTA 153533 ||| | || ||||| ||| ||||| || ||||| | ||| || | |||| Sbjct 43115 TCGGGAACAGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTGACGAGGACTTGG 43174 Query 153534 GTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTC 153593 | | || |||| ||| |||||| | | | ||| || | | Sbjct 43175 ACAACATTGTGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATCAACAAAGGTAGGA 43234 Query 153594 ACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGAT 153652 | || | ||| |||| ||| || || || ||| || || | || |||||| || || Sbjct 43235 AGAGCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCG-TGTACTCAACAAT 43293 Query 153653 CTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATT 153712 |||| |||||||||| || ||| ||| | || | ||| ||||| ||||| || Sbjct 43294 CTCGCAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTT 43353 Query 153713 GCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT--- 153769 ||| || || ||| ||||||| | || |||||||||| || | |||| ||| Sbjct 43354 GCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGC 43413 Query 153770 AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCG 153829 | ||| ||| | || || || || || ||| ||||| || || ||||| | Sbjct 43414 ATACCA---CAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCT 43470 Query 153830 CTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGG 153889 |||||| || ||| |||||||||||||| |||||| || || || || || || Sbjct 43471 CTCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGG 43530 Query 153890 ACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCA 153949 || | || | ||| | ||| | || || |||||||||||| || | ||| Sbjct 43531 GCAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCA 43590 Query 153950 GAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTC--AGA 154007 | |||||| | |||||||||||| | |||||| || ||| || | || Sbjct 43591 CAACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTT--CTTGCGAAGG 43648 Query 154008 TTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTA 154067 | ||| | | ||| ||| |||||||| || || | ||||| ||| | ||||| | Sbjct 43649 TCGAGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGA 43708 Query 154068 CGC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGT 154124 ||| || || || || ||||||| ||| | | |||||| |||| || | |||||| Sbjct 43709 CGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGA 43768 Query 154125 TCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGA 154184 ||||||| | | ||| |||||||| | || | | ||| || || | | Sbjct 43769 ATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGG 43828 Query 154185 TGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCG 154242 || ||||| | ||||| || || ||||| ||| || || ||| | |||| || | Sbjct 43829 TGGACGTTGAGACCAATTCCACCGGCCGT-CTTGGAAATCATAGCACAAGTC-TTGAGAG 43886 Query 154243 TCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTT 154302 | ||| || || |||||||| || || | | ||| |||||| || || | | Sbjct 43887 TGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCT 43946 Query 154303 GCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAA-CAGTTTTTGG 154361 | || || | || || || || | |||||| || || ||||| || |||| | Sbjct 43947 GGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCG 44006 Query 154362 CTCATCATGCGGTACGTTTCGATGGC-GTCTTCGATATCATCGCCGTGAATGCCGAGCGC 154420 ||||| ||||||||||| ||| || | || || |||||||| || |||| || Sbjct 44007 -ACATCAACTTGTACGTTTCGAGGGCACTCGT-TATGTCTTCGCCGTGGATACCGACAGC 44064 Query 154421 GACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACT 154457 || ||||||| |||||||||||| | |||||| ||| Sbjct 44065 AACACGCATGATCATGTGCTGCGGTCTTTCGGCAACT 44101 >seq496 Length=30664 Score = 147 bits (162), Expect = 2e-30 Identities = 256/366 (70%), Gaps = 11/366 (3%) Strand=Plus/Plus Query 52476 GGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCAC 52535 ||| | ||||| ||||| || ||| ||||||| | || || || ||||| || ||||| Sbjct 5467 GGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCAC 5526 Query 52536 ACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGAC--CGAAAAATTGGATTCGGACA 52593 || |||||||| ||||| || | | | | | | | || || | | || | Sbjct 5527 ACCGACTTTGCCTGCCTGCTCTTCT---CTCACATCAAGTCCAAGCCTTCGC--CCGAGA 5581 Query 52594 CGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGC 52653 | | ||| || ||| ||||| || | || || | ||||| |||| | ||| | Sbjct 5582 CTGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTACCGACGCTC 5641 Query 52654 TGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGG 52713 | || |||| ||||| ||||||||||| ||||||| |||||||||||||||| | Sbjct 5642 TTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGAGTTTGTTG 5701 Query 52714 CGGATCGTCTGTTGGTGCAGCTC-GGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTT 52771 | || || ||| ||||| |||| |||| | | |||| || |||| | ||| || || Sbjct 5702 CCGACCGCCTGCTGGTG--GCTCTTGGCAACAAGAAGTTCTACAACTCGACCAACCCCTT 5759 Query 52772 TGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGG 52831 || || ||| | ||||||||||| | |||||||||||||| ||||||||||| || || Sbjct 5760 CGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGTGTTGG 5819 Query 52832 CGAGTA 52837 || || Sbjct 5820 TGACTA 5825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496254081401520