Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq546 156 5e-33
seq496 87.8 2e-12
>seq546
Length=57559
Score = 156 bits (172), Expect = 5e-33
Identities = 1148/1822 (63%), Gaps = 68/1822 (4%)
Strand=Plus/Plus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|| ||||||||||| || |||||||| || |||||||| | | ||||| ||||
Sbjct 42366 CGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTGCATGGAGGTG 42425
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 115676
| |||| | || || | |||| || ||||| ||||| || ||||||||
Sbjct 42426 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTGGTCGATGAAA 42485
Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTT 115734
||| || || || || ||||| | | || || | | || | ||||| || ||
Sbjct 42486 GCG-CCGCGGTCAGCAGCCATCTGCA-CA-ATGGTGCGCTGCGAAATCTCCCAGACGGTC 42542
Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794
||||||| ||| || ||||| || || | |||| |||||||||||| |||
Sbjct 42543 TTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGGAATATCCTGGATAGAGCCAT-TGCA 42601
Query 115795 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851
| | |||| | | |||||| | | |||||| | || |||| ||| ||||
Sbjct 42602 --GGCAATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGACGAGGTCCTTG 42659
Query 115852 A----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGAT 115907
| | ||| | ||||| || |||||||| |||||| || | | |||||
Sbjct 42660 AGAAGCCAGGGG----TTGACGACCTGGAACTCACCGGCGAGGACACGGCGCGAGTAGAT 42715
Query 115908 GTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTG 115966
||||| ||||| ||||| || || || ||| | || ||| | ||||| | ||||| |
Sbjct 42716 GTTGGAGGTGTAAGGCTCGAAACATTCGTTGA-AGCCGAGAATCTGGCTGGTCGAGGCAG 42774
Query 115967 TGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGA 116026
| ||||| || || | ||| | |||||| || | ||| | ||| | ||| |
Sbjct 42775 TCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAGCAATCTCTGACTTCA 42834
Query 116027 GGGCGTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTCCCACATATCAAACTGGAGG 116082
|| |||||||| | | || | | |||| | |||||| || |||| | |
Sbjct 42835 GGCTCTCCCAGTCCCA-TAGATCCGTAGGGGTCTTG---TTCCACATGTCGTACTGCAAG 42890
Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142
|||||||| || | ||||||||||| | ||||| || | || | || ||||
Sbjct 42891 ATACCTTGAGAGACAGGCGATCCCTCGTAAGTCTCGTAGGCACCGTTCTTCTTGGCCAGC 42950
Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGC 116201
||| | ||| ||| || ||||| || || || || || || | || | ||||
Sbjct 42951 TCGACGGAAGCCGTGAGAGC-GCGTGGTAGATGGTTTCGAAGATCTGTATGTTGAGTTGC 43009
Query 116202 CTTGGCCTCGTCGGAATC-AAACGC--GAGACG-GCACAAAATAAATACATCCGCGAGAC 116257
|| ||||||| || || ||| || | || | || | ||| |||| || || |
Sbjct 43010 CT-GGCCTCGGGCGAGTCGAAAGGCATGCGAAGAGCG----AGGAATGCATCAGCAAGGC 43064
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---A 116314
| | |||||||| |||| |||||||| | ||| || ||||| || ||| |
Sbjct 43065 CGTTGACACCGACAGCAATGGGGCGATGGCGCATGTTGCTCTTTCTGGC---CTCGGGAA 43121
Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374
| || || || | ||||| | | | || | || ||| || || ||| ||
Sbjct 43122 CAGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTGACGAGGAC--TTG-GACAA 43178
Query 116375 CAT---GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 116431
||| | ||||| | | | ||| | | ||| ||| ||| | ||||||| |
Sbjct 43179 CATTGTGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATCAACAAAGGTAGGAAGAG 43238
Query 116432 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491
||| || |||| ||| || |||| |||||| | | |||||||| | ||| ||
Sbjct 43239 CGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCGC 43298
Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551
|| | || || || ||||||||| | |||||| || || ||| ||| || |
Sbjct 43299 AGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAG 43358
Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611
||||||||||||||||| | || | || ||||| || || | || ||| || || | ||
Sbjct 43359 CATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACC 43418
Query 116612 ATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 116671
| | | ||| | || || || | || || ||| |||||| | |||||
Sbjct 43419 ACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTAGA 43478
Query 116672 GGGCCTCAAACTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730
| |||| ||||| || || ||| | || | || || || |||| | || || |||
Sbjct 43479 GCTCCTCGAACTCGTCGCCGTACA-CGTCGGCAAGACCCGGGGCCTCGTGAGGGCAAAAG 43537
Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790
|||| ||||| ||| | ||| || ||||||||||| || || || ||||| | |||
Sbjct 43538 AGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCG 43597
Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850
| ||||| || || ||| | || || | || || || || | || | |||
Sbjct 43598 TAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAG 43657
Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGA 116904
| || || |||||||| || |||||||| | || | | || | ||||
Sbjct 43658 GGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTG--- 43714
Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964
||| | |||| || || | || || ||| | || || ||||| ||||| |
Sbjct 43715 TTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGG 43774
Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGA 117022
|| | || || || || || || || ||| || ||| | | | |||||
Sbjct 43775 CCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCT--GTGGAACGAATACGGTGGA 43832
Query 117023 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGT 117082
|| | |||||| || || ||| ||| || || || || | ||||| || |||
Sbjct 43833 CGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGT 43892
Query 117083 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142
| || || ||||| ||| |||| | |||| | |||||| | | || |||
Sbjct 43893 AAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCT 43952
Query 117143 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCT 117202
| || |||||||||||||| | ||| || | || || | || || ||||||
Sbjct 43953 TGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCA 44012
Query 117203 TATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCA 117262
| ||| || || | | || | |||||||| ||||| ||||||| | || ||||
Sbjct 44013 ACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCA 44072
Query 117263 TAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCT 117322
| | ||||| || ||| |||| | | |||| || | | | ||| | |||
Sbjct 44073 TGATCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCGAAGCAAGTATGACCTCT 44132
Query 117323 CCAAGGTCTTGAGACCAAAATA 117344
||| ||||||| |||||||||
Sbjct 44133 CCAGTGTCTTGAAACCAAAATA 44154
>seq496
Length=30664
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | |||||||||||||||||||| || || |||||| || ||
Sbjct 5537 GCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCA 5478
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| || || |||||||| | |||||| || | || || || |||||||||
Sbjct 5477 GGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGATA 5418
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AA 127698
||||| ||| || || |||| ||||| ||||||| || | |||| || |
Sbjct 5417 CCCTCGACAGCAGCAAAGGCAATCAGACGGGATGCAAAGG-TCGAGTTCTTGTCACAGAT 5359
Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740
||| | ||||| | |||||||||| ||| || || ||
Sbjct 5358 CCAGCGGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGAAC 5317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613496916085560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |