Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq546 156 5e-33 seq496 87.8 2e-12 >seq546 Length=57559 Score = 156 bits (172), Expect = 5e-33 Identities = 1148/1822 (63%), Gaps = 68/1822 (4%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| || |||||||| | | ||||| |||| Sbjct 42366 CGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTGCATGGAGGTG 42425 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 115676 | |||| | || || | |||| || ||||| ||||| || |||||||| Sbjct 42426 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTGGTCGATGAAA 42485 Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTT 115734 ||| || || || || ||||| | | || || | | || | ||||| || || Sbjct 42486 GCG-CCGCGGTCAGCAGCCATCTGCA-CA-ATGGTGCGCTGCGAAATCTCCCAGACGGTC 42542 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 ||||||| ||| || ||||| || || | |||| |||||||||||| ||| Sbjct 42543 TTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGGAATATCCTGGATAGAGCCAT-TGCA 42601 Query 115795 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851 | | |||| | | |||||| | | |||||| | || |||| ||| |||| Sbjct 42602 --GGCAATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGACGAGGTCCTTG 42659 Query 115852 A----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGAT 115907 | | ||| | ||||| || |||||||| |||||| || | | ||||| Sbjct 42660 AGAAGCCAGGGG----TTGACGACCTGGAACTCACCGGCGAGGACACGGCGCGAGTAGAT 42715 Query 115908 GTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTG 115966 ||||| ||||| ||||| || || || ||| | || ||| | ||||| | ||||| | Sbjct 42716 GTTGGAGGTGTAAGGCTCGAAACATTCGTTGA-AGCCGAGAATCTGGCTGGTCGAGGCAG 42774 Query 115967 TGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGA 116026 | ||||| || || | ||| | |||||| || | ||| | ||| | ||| | Sbjct 42775 TCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAGCAATCTCTGACTTCA 42834 Query 116027 GGGCGTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTCCCACATATCAAACTGGAGG 116082 || |||||||| | | || | | |||| | |||||| || |||| | | Sbjct 42835 GGCTCTCCCAGTCCCA-TAGATCCGTAGGGGTCTTG---TTCCACATGTCGTACTGCAAG 42890 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 |||||||| || | ||||||||||| | ||||| || | || | || |||| Sbjct 42891 ATACCTTGAGAGACAGGCGATCCCTCGTAAGTCTCGTAGGCACCGTTCTTCTTGGCCAGC 42950 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGC 116201 ||| | ||| ||| || ||||| || || || || || || | || | |||| Sbjct 42951 TCGACGGAAGCCGTGAGAGC-GCGTGGTAGATGGTTTCGAAGATCTGTATGTTGAGTTGC 43009 Query 116202 CTTGGCCTCGTCGGAATC-AAACGC--GAGACG-GCACAAAATAAATACATCCGCGAGAC 116257 || ||||||| || || ||| || | || | || | ||| |||| || || | Sbjct 43010 CT-GGCCTCGGGCGAGTCGAAAGGCATGCGAAGAGCG----AGGAATGCATCAGCAAGGC 43064 Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---A 116314 | | |||||||| |||| |||||||| | ||| || ||||| || ||| | Sbjct 43065 CGTTGACACCGACAGCAATGGGGCGATGGCGCATGTTGCTCTTTCTGGC---CTCGGGAA 43121 Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 | || || || | ||||| | | | || | || ||| || || ||| || Sbjct 43122 CAGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTGACGAGGAC--TTG-GACAA 43178 Query 116375 CAT---GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 116431 ||| | ||||| | | | ||| | | ||| ||| ||| | ||||||| | Sbjct 43179 CATTGTGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATCAACAAAGGTAGGAAGAG 43238 Query 116432 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491 ||| || |||| ||| || |||| |||||| | | |||||||| | ||| || Sbjct 43239 CGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCGC 43298 Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551 || | || || || ||||||||| | |||||| || || ||| ||| || | Sbjct 43299 AGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAG 43358 Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611 ||||||||||||||||| | || | || ||||| || || | || ||| || || | || Sbjct 43359 CATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACC 43418 Query 116612 ATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 116671 | | | ||| | || || || | || || ||| |||||| | ||||| Sbjct 43419 ACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTAGA 43478 Query 116672 GGGCCTCAAACTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 | |||| ||||| || || ||| | || | || || || |||| | || || ||| Sbjct 43479 GCTCCTCGAACTCGTCGCCGTACA-CGTCGGCAAGACCCGGGGCCTCGTGAGGGCAAAAG 43537 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 |||| ||||| ||| | ||| || ||||||||||| || || || ||||| | ||| Sbjct 43538 AGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCG 43597 Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 | ||||| || || ||| | || || | || || || || | || | ||| Sbjct 43598 TAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAG 43657 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGA 116904 | || || |||||||| || |||||||| | || | | || | |||| Sbjct 43658 GGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTG--- 43714 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 ||| | |||| || || | || || ||| | || || ||||| ||||| | Sbjct 43715 TTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGG 43774 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGA 117022 || | || || || || || || || ||| || ||| | | | ||||| Sbjct 43775 CCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCT--GTGGAACGAATACGGTGGA 43832 Query 117023 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGT 117082 || | |||||| || || ||| ||| || || || || | ||||| || ||| Sbjct 43833 CGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGT 43892 Query 117083 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142 | || || ||||| ||| |||| | |||| | |||||| | | || ||| Sbjct 43893 AAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCT 43952 Query 117143 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCT 117202 | || |||||||||||||| | ||| || | || || | || || |||||| Sbjct 43953 TGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCA 44012 Query 117203 TATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCA 117262 | ||| || || | | || | |||||||| ||||| ||||||| | || |||| Sbjct 44013 ACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCA 44072 Query 117263 TAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCT 117322 | | ||||| || ||| |||| | | |||| || | | | ||| | ||| Sbjct 44073 TGATCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCGAAGCAAGTATGACCTCT 44132 Query 117323 CCAAGGTCTTGAGACCAAAATA 117344 ||| ||||||| ||||||||| Sbjct 44133 CCAGTGTCTTGAAACCAAAATA 44154 >seq496 Length=30664 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||||||||||||||| || || |||||| || || Sbjct 5537 GCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCA 5478 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || || |||||||| | |||||| || | || || || ||||||||| Sbjct 5477 GGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGATA 5418 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AA 127698 ||||| ||| || || |||| ||||| ||||||| || | |||| || | Sbjct 5417 CCCTCGACAGCAGCAAAGGCAATCAGACGGGATGCAAAGG-TCGAGTTCTTGTCACAGAT 5359 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||| | ||||| | |||||||||| ||| || || || Sbjct 5358 CCAGCGGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGAAC 5317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613496916085560