Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq496 174 2e-38
seq546 134 2e-26
seq838 87.8 3e-12
>seq496
Length=30664
Score = 174 bits (192), Expect = 2e-38
Identities = 336/495 (68%), Gaps = 3/495 (1%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | || || |||||||| |||| |||||
Sbjct 5811 CTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCCATGAAGTCGAAGGGGTT 5752
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
|| || ||| |||| || |||||| |||||| | ||| || ||||| ||
Sbjct 5751 GGTCGAGTTGTAGAACTTCTTGTTGCCAAGAGCCACCAGCAGGCGGTCGGCAACAAACTC 5692
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| ||||| | | ||| || || ||||| ||||| || || || |
Sbjct 5691 GATGTACTGGCACATGAGGGTAGCGTTCATGCCGAGCAGGGCGACGGGAAGAGCGTCGGT 5632
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888
|| ||||| | ||| |||||||| || ||||| | ||| | ||| ||| |
Sbjct 5631 AAGGAACTCTTGCTCCATCTCGACGGCCTCGGTGATGATCCTCTCCACAGTCTCGGGCGA 5572
Query 159889 CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948
|||||| | ||||| || || ||||| ||||||||| ||||| |||||
Sbjct 5571 AGGCTTGGACTTGATGTG---AGAGAAGAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTC 5515
Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008
||| || ||||||| ||||||||| | | | ||||| ||||| | |||||| |||||
Sbjct 5514 GTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATCAGGCCACGCTTCTTGAG 5455
Query 160009 CCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCAC 160068
||| || |||| ||| || | |||||| || ||||| ||||| || || ||||| || |
Sbjct 5454 CCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGATACCCTCGACAGCAGCAAAGGCAAT 5395
Query 160069 GAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT 160128
|| | |||| | | ||| ||||| | |||| | |||||| || |||||
Sbjct 5394 CAGACGGGATGCAAAGGTCGAGTTCTTGTCACAGATCCAGCGGAGGGCCCAGTCGGCCTT 5335
Query 160129 CTTTGCGATGCACGG 160143
|| |||||| ||
Sbjct 5334 TTTCTTGATGCAGGG 5320
>seq546
Length=57559
Score = 134 bits (148), Expect = 2e-26
Identities = 333/496 (67%), Gaps = 7/496 (1%)
Strand=Plus/Plus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACAT 203895
||||| || || ||||| ||||| | || | | |||||| | | ||| ||||||||
Sbjct 42321 TCTTGGTCGACAGTGAATTGAATTG-GTGCGGAGGCCGCCTGCGTACGCAGGTAGTACAT 42379
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955
||| ||||| || || || ||| ||| | ||||||||| | | |||| || |
Sbjct 42380 GCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTGCATGGAGGTGATCTTGCCCATAGT 42439
Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014
|| || |||||| |||||||| |||||| |||||||||||| ||||| || || |
Sbjct 42440 AGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTGGTCGATGAAA-GCGCCGCGGTCAG 42498
Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074
| ||||| | | |||||| ||||||||||||||| || |||||| | | | ||
Sbjct 42499 CAGCCATCTGCACAATGGTGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTGA 42558
Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
||| | || | | | | |||| ||| ||||| ||| ||| || | | ||
Sbjct 42559 TGTCATCGGGAATGT-TGGGAATATCCTGGATAGAGCCATTGCAGGCAATGATACGGTTC 42617
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | || ||||| ||||| | || || ||| | || |||||||| |
Sbjct 42618 TTCATGTTGTCTGACCACAAGCCCATCTCGACGAGGTCCTTGAGAAGCCAGGGGTTGACG 42677
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || |||| || || | || | | | | |||| |||| | || |||||
Sbjct 42678 ACCTGGAACTCACCGGCGAGGACACGGCGCGAGTAGATGTTGGAGGTGTAAGGCTCGAAA 42737
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|||||| ||||| |||||| ||| ||| || ||||| || || | ||||| |
Sbjct 42738 CATTCGTTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTCGGCATAGGGGCAACGAGCAAG 42797
Query 204314 GAGTTGCGCACACCGT 204329
||| ||||||||||
Sbjct 42798 CTGTTCCGCACACCGT 42813
>seq838
Length=49465
Score = 87.8 bits (96), Expect = 3e-12
Identities = 133/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 116100 CTGTTTTACCAAAGATC-TGCAGACATGGGGTTGGGCGTACCCTTTAACGTTGCGAGCTA 116158
||||| |||||| | || ||| ||||||||| | ||||| || || ||| |||| |||||
Sbjct 13468 CTGTTGTACCAACGGTCCTGC-GACATGGGGCTCGGCGTGCCTTTCAACATTGCCAGCTA 13526
Query 116159 CGCGCTACTGACTCATATTATGGCACATTTGGCGGACCTGGAAGTCGGAGAATTGATACA 116218
|||||| ||||| ||||| |||| || | ||||||| ||| | | ||
Sbjct 13527 CGCGCTGCTGACGCATATGCTGGCGCACGTCTGCGACCTGGTGCCCGGCTCGCTAACGCA 13586
Query 116219 CTCTATTGGGGACGCGCACATCTACACCAACCATGTGGCGCAGCTCGAGCTGCAGGTGAA 116278
| | || || ||||| ||| ||||| | ||||||||| | || || ||||| || |
Sbjct 13587 CACCATGGGCGACGCCCACGTCTACCTCGACCATGTGGAGGCCCTGAAGGTGCAGTTGGA 13646
Query 116279 GCGGGAG 116285
||| |||
Sbjct 13647 GCGCGAG 13653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795141871210960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |