Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq496 174 2e-38 seq546 134 2e-26 seq838 87.8 3e-12 >seq496 Length=30664 Score = 174 bits (192), Expect = 2e-38 Identities = 336/495 (68%), Gaps = 3/495 (1%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | | || || |||||||| |||| ||||| Sbjct 5811 CTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCCATGAAGTCGAAGGGGTT 5752 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 || || ||| |||| || |||||| |||||| | ||| || ||||| || Sbjct 5751 GGTCGAGTTGTAGAACTTCTTGTTGCCAAGAGCCACCAGCAGGCGGTCGGCAACAAACTC 5692 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||| | | ||| || || ||||| ||||| || || || | Sbjct 5691 GATGTACTGGCACATGAGGGTAGCGTTCATGCCGAGCAGGGCGACGGGAAGAGCGTCGGT 5632 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 || ||||| | ||| |||||||| || ||||| | ||| | ||| ||| | Sbjct 5631 AAGGAACTCTTGCTCCATCTCGACGGCCTCGGTGATGATCCTCTCCACAGTCTCGGGCGA 5572 Query 159889 CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948 |||||| | ||||| || || ||||| ||||||||| ||||| ||||| Sbjct 5571 AGGCTTGGACTTGATGTG---AGAGAAGAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTC 5515 Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008 ||| || ||||||| ||||||||| | | | ||||| ||||| | |||||| ||||| Sbjct 5514 GTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATCAGGCCACGCTTCTTGAG 5455 Query 160009 CCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCAC 160068 ||| || |||| ||| || | |||||| || ||||| ||||| || || ||||| || | Sbjct 5454 CCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGATACCCTCGACAGCAGCAAAGGCAAT 5395 Query 160069 GAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT 160128 || | |||| | | ||| ||||| | |||| | |||||| || ||||| Sbjct 5394 CAGACGGGATGCAAAGGTCGAGTTCTTGTCACAGATCCAGCGGAGGGCCCAGTCGGCCTT 5335 Query 160129 CTTTGCGATGCACGG 160143 || |||||| || Sbjct 5334 TTTCTTGATGCAGGG 5320 >seq546 Length=57559 Score = 134 bits (148), Expect = 2e-26 Identities = 333/496 (67%), Gaps = 7/496 (1%) Strand=Plus/Plus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACAT 203895 ||||| || || ||||| ||||| | || | | |||||| | | ||| |||||||| Sbjct 42321 TCTTGGTCGACAGTGAATTGAATTG-GTGCGGAGGCCGCCTGCGTACGCAGGTAGTACAT 42379 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| || || || ||| ||| | ||||||||| | | |||| || | Sbjct 42380 GCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTGCATGGAGGTGATCTTGCCCATAGT 42439 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 || || |||||| |||||||| |||||| |||||||||||| ||||| || || | Sbjct 42440 AGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTGGTCGATGAAA-GCGCCGCGGTCAG 42498 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074 | ||||| | | |||||| ||||||||||||||| || |||||| | | | || Sbjct 42499 CAGCCATCTGCACAATGGTGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTGA 42558 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 ||| | || | | | | |||| ||| ||||| ||| ||| || | | || Sbjct 42559 TGTCATCGGGAATGT-TGGGAATATCCTGGATAGAGCCATTGCAGGCAATGATACGGTTC 42617 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | || ||||| ||||| | || || ||| | || |||||||| | Sbjct 42618 TTCATGTTGTCTGACCACAAGCCCATCTCGACGAGGTCCTTGAGAAGCCAGGGGTTGACG 42677 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| || || | || | | | | |||| |||| | || ||||| Sbjct 42678 ACCTGGAACTCACCGGCGAGGACACGGCGCGAGTAGATGTTGGAGGTGTAAGGCTCGAAA 42737 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||| ||||| |||||| ||| ||| || ||||| || || | ||||| | Sbjct 42738 CATTCGTTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTCGGCATAGGGGCAACGAGCAAG 42797 Query 204314 GAGTTGCGCACACCGT 204329 ||| |||||||||| Sbjct 42798 CTGTTCCGCACACCGT 42813 >seq838 Length=49465 Score = 87.8 bits (96), Expect = 3e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 116100 CTGTTTTACCAAAGATC-TGCAGACATGGGGTTGGGCGTACCCTTTAACGTTGCGAGCTA 116158 ||||| |||||| | || ||| ||||||||| | ||||| || || ||| |||| ||||| Sbjct 13468 CTGTTGTACCAACGGTCCTGC-GACATGGGGCTCGGCGTGCCTTTCAACATTGCCAGCTA 13526 Query 116159 CGCGCTACTGACTCATATTATGGCACATTTGGCGGACCTGGAAGTCGGAGAATTGATACA 116218 |||||| ||||| ||||| |||| || | ||||||| ||| | | || Sbjct 13527 CGCGCTGCTGACGCATATGCTGGCGCACGTCTGCGACCTGGTGCCCGGCTCGCTAACGCA 13586 Query 116219 CTCTATTGGGGACGCGCACATCTACACCAACCATGTGGCGCAGCTCGAGCTGCAGGTGAA 116278 | | || || ||||| ||| ||||| | ||||||||| | || || ||||| || | Sbjct 13587 CACCATGGGCGACGCCCACGTCTACCTCGACCATGTGGAGGCCCTGAAGGTGCAGTTGGA 13646 Query 116279 GCGGGAG 116285 ||| ||| Sbjct 13647 GCGCGAG 13653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795141871210960