Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq731 127 5e-24 seq923 114 3e-20 seq363 95.1 3e-14 seq670 93.3 1e-13 >seq731 Length=88763 Score = 127 bits (140), Expect = 5e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 88354 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCC 88295 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| ||||||||||||||||| ||| || || ||| Sbjct 88294 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 88235 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| |||| |||||| | | || || || | ||||| ||| Sbjct 88234 TGAATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTC 88175 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 88174 TTGCCGGTGA 88165 Score = 120 bits (132), Expect = 7e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| ||||||||||| |||||||| |||| ||||||||| | | || Sbjct 88647 CGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTG 88588 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||||||||| ||||||||||||||| || || Sbjct 88587 CGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCC 88528 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| ||| |||| |||||| | | || || || | Sbjct 88527 TCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCGAGG 88468 Query 199589 GTGATCGTCTTACCCGTGA 199607 ||||| ||||| || |||| Sbjct 88467 GTGATGGTCTTGCCGGTGA 88449 >seq923 Length=2568 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || || |||||||| |||| ||||||||| | ||| ||| Sbjct 322 CGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTC 263 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| || |||||||| || |||||||| | ||||||||||| || || || Sbjct 262 CTGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCC 203 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| || | || || | | ||| || || | | Sbjct 202 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGC 143 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || || || || || || || || Sbjct 142 GTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTG 105 >seq363 Length=34683 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| |||||||| ||||||||||| |||| ||||||||| | | || Sbjct 5299 CGCAGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 5358 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || || |||||||| ||||||||||| | ||||||||||| || Sbjct 5359 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGG 5408 >seq670 Length=49272 Score = 93.3 bits (102), Expect = 1e-13 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | || || || |||||||| |||||||||| Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || |||||||||||||| ||| || || ||||| ||||| ||| || | Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| ||||| || || || || | Sbjct 38528 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 38587 Query 199620 A 199620 | Sbjct 38588 A 38588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178901344284847