Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq817 224 1e-53 seq644 172 7e-38 seq546 136 5e-27 seq449 87.8 2e-12 >seq817 Length=164323 Score = 224 bits (248), Expect = 1e-53 Identities = 419/615 (68%), Gaps = 3/615 (0%) Strand=Plus/Plus Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||||||||| ||||| ||||| | | ||||| || ||| | ||||| || Sbjct 68393 TTCTTATGTTTGCGTTTGAACTCATTAACAAAGTGGTTAACGAGGCGGTTGTCGAAGTCC 68452 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || ||||||||||| || || || ||||| | ||||| || |||||||| | || ||| Sbjct 68453 TCGCCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATG 68512 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | | || || ||||| || ||||||||||| ||||| || ||||| ||||| ||| Sbjct 68513 GTGAGCAGGGAGACATCGAAGGTACCACCACCAAGGTCGAAGATGAGGACGTTGCGCTCG 68572 Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645 | | ||||| || |||||||| || || || || || || || || || || ||| Sbjct 68573 CCAGTGGTCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCGTTGATGATA 68632 Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 || || ||| || |||||||| | ||||| || || || || || || || ||| Sbjct 68633 CGGAGGACGTTGAGACCAGCAATCAGACCGGCATCCTTGGTGGCCTGGCGCTGAGAGTCG 68692 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 || |||||||| ||||| || ||||| |||| |||| | ||| || || || || Sbjct 68693 TTGAAGTAGGCGGGGACGGTGACGACAGCGTTGTTGACGGTGCCACCAAGGTAAGACTCA 68752 Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825 || | || |||| ||||| || ||||| || || || || |||| | || ||| Sbjct 68753 GCAGTCTCCCTCATCTTGGTCAGGACCATGGAGGAGATTTCCTCAGGAGTGAAGACCTTC 68812 Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885 || || || || || || | || | ||| || |||| ||| | ||| Sbjct 68813 TCCTCGCCCTTGAACTCGACCTGGATGACGGGCTT---GCCAGCCTTCTCGATGATCTTG 68869 Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945 | | | | ||||| ||| | || |||| ||| ||||| | ||||| ||| Sbjct 68870 AAGGGGAAGTGCTTCATGTCGGCCTGCACCTCAGCGTCGTTGAACTTGCGACCGATGAGA 68929 Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005 ||||| || || || || ||||| | |||||||||||| ||||||||||||| ||| Sbjct 68930 CGCTTGGCGTCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTCGCCGAGTCA 68989 Query 8006 CCGATAAGACGTTCA 8020 || || ||||| ||| Sbjct 68990 CCAATCAGACGCTCA 69004 >seq644 Length=23542 Score = 172 bits (190), Expect = 7e-38 Identities = 351/515 (68%), Gaps = 15/515 (3%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| ||| | | ||| || |||||||| | | ||| Sbjct 19770 AGCTCCTCGAAACGGGCACGGGTGATGTTGGCGTTGAAGTCCTCGCCGTCGAAGAGCGAG 19711 Query 7304 TCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| || | ||| || || || ||| | || | || ||||| || ||||| || | Sbjct 19710 TCAATCTCGACGGTGGTCTGGGTGGCGTTG--GAAAGGGTACGCTTGGCACGCTCGCAAG 19653 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || || | |||||| |||||||| | || || ||||| || ||||| || || | Sbjct 19652 CAGTCCGGAGACGACGGAGGGCACGGGCGTCGCCAGAAATGTCCTTCTTGGTCTTGCGCT 19593 Query 7422 TAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 ||||| ||| | ||||| |||||| | | || || || | |||||| | ||| Sbjct 19592 GGAACTCCTTCTTA-AAGTGCTCAAGGAGGTTGGTGTCAAAGTCCTGACCACCAAGGTGA 19534 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || ||||| || ||||| |||| ||| || | |||| | | || ||| Sbjct 19533 GTGTCACCAGCGGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTGGAGGAGGGACACA 19474 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600 || || ||||||||||| ||||| | ||||| |||||| | || | ||| | ||| Sbjct 19473 TCGAAAGTACCACCACCAAGGTCGTAGATGAGGACGTTCCTCTC--CTTCTCAG-ACTTG 19417 Query 7601 TCG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 || |||||||| || || || || || || || || || || ||||| || | Sbjct 19416 CCGGAGCCAAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACG 19357 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || ||||| ||||| | | || || || || || || || || ||||| |||||| Sbjct 19356 TTGAGGCCGGCAATGGCACCGGCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAG 19297 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 || ||||| || | ||| || | | ||| ||||| Sbjct 19296 GCGGGGACGGTGATGACGGCCTTCTCGACCTTCTT 19262 >seq546 Length=57559 Score = 136 bits (150), Expect = 5e-27 Identities = 357/543 (66%), Gaps = 15/543 (3%) Strand=Plus/Plus Query 105454 CCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGA 105513 ||||| |||||| ||||||| || || || ||||| | ||||||||||| | |||| Sbjct 43454 CCTTCCCTTTCGTACCTCTCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGA 43513 Query 105514 CCCTTTGCCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATG 105573 ||| |||| | ||| ||||| | | ||| | ||| | || || || |||||| Sbjct 43514 CCCGGGGCCTCGTGAGGGCAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATG 43573 Query 105574 AACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCT 105633 |||| ||| |||||||||| || |||||||||| || | |||| || | || Sbjct 43574 AACAGATCGGGAATCCACAACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCG 43633 Query 105634 TGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACT 105693 || ||| |||| ||||| || || | || |||||||| || || | |||| Sbjct 43634 TGGTTCTTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATG 43693 Query 105694 GCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTA 105747 |||| || || | ||||| || |||| | ||| || | || || ||| Sbjct 43694 GCAAAAGCACC---AGGACGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTG 43750 Query 105748 TACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGAT 105807 || ||||| | ||| ||||| | || | ||| || || || || ||| ||| | || Sbjct 43751 TAGACTCGGAGCATGGGAATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAG 43810 Query 105808 TTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT---ACTGATA 105864 | | ||| | | ||| |||| | ||||| || || ||| ||| | | ||| Sbjct 43811 CCTGTGGAACGAATACGGTGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATA 43870 Query 105865 CGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATC 105924 ||||| || | || ||||||||||| ||||| || || ||||| | | ||| Sbjct 43871 ---GCACAAGTCTTGAGAGTGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATC 43927 Query 105925 AGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCA 105984 | ||| || |||| | || || |||| |||||||| ||||||| || || | ||| Sbjct 43928 AAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCA 43987 Query 105985 TGA 105987 ||| Sbjct 43988 TGA 43990 >seq449 Length=42970 Score = 87.8 bits (96), Expect = 2e-12 Identities = 237/361 (66%), Gaps = 9/361 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| | | ||| || || | || Sbjct 39911 TCAAAGTCCTCACCACCAAGGTGGGTGTCACCAGCGGTGGACTGGACCTCGAAAACGCCC 39970 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA-- 7574 | |||| | | | || ||||| || ||||||||||| ||||| | | || | Sbjct 39971 TCGTCAACAGTCAGGATGGAGACATCGAAAGTACCACCACCAAGGTCGTAGACGATGATC 40030 Query 7575 ---CGTTCGTA-TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 || || | | |||||| || ||| || |||||||| || | || ||||| || Sbjct 40031 TGGCGCTCCGACTTGTCGTCCTT---CTTGTCAAGACCGTAGGCAAGGGCAGCCGCGGTG 40087 Query 7631 GGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690 || || || | | ||| || ||| || || || || || | || || || || || Sbjct 40088 GGCTCGTTGACGACACGGAGGACGTTGAGACCGGCGATGGTGCCAGCGTCCTTGGTAGCG 40147 Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750 || || | ||||| |||||||||||||| || || || |||| || ||| | Sbjct 40148 GCACGCTGGGCGTCGTTGAAGTAGGCCGGGACAGTCACAACGGCGTTACGAACAGTCTCA 40207 Query 7751 CCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCA 7810 || || || || |||| || ||||| ||| |||||||| | |||||||||| Sbjct 40208 CCAAGGTAGCTCTCGGCGACCTCCTTCATCTTGCCGAGAACCATGGCGCTAATCTCTTCA 40267 Query 7811 G 7811 | Sbjct 40268 G 40268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635122153586440