Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq546 168 8e-37 seq1080 109 6e-19 >seq546 Length=57559 Score = 168 bits (186), Expect = 8e-37 Identities = 596/928 (64%), Gaps = 11/928 (1%) Strand=Plus/Plus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| | ||| || | |||||| |||| | ||| || | ||||| || | | Sbjct 43232 GGAAGAGCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACA 43291 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || || || | |||||| || |||| || | ||||||||| || ||| | Sbjct 43292 ATCTCGCAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 43351 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||||| |||||||| |||||||| | || | || || || ||||| | || ||| ||| Sbjct 43352 TTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATG 43411 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTG 110520 || | ||| | | |||| |||| || || | | | |||||| |||||| | Sbjct 43412 GCATACCACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTC 43471 Query 110521 GTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGA 110580 ||| | ||||| || || | |||||||| || | ||||||| |||| || || Sbjct 43472 TCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGG 43531 Query 110581 CAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCAC 110640 || ||||| | ||| | || | ||| || | |||||||||||| || ||||||||| Sbjct 43532 CAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCAC 43591 Query 110641 ATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCC 110700 | ||| | || ||||| || || |||| || | || ||||| ||| || || Sbjct 43592 AACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCG 43651 Query 110701 AAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGA 110760 | ||| | || || | |||||| || || || |||| || | | || | || Sbjct 43652 AGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACC---AGGA 43708 Query 110761 CG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 || || | |||| || ||||| || ||| ||| |||| | |||||| ||| Sbjct 43709 CGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGA 43768 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874 || | || | ||| ||| || || || ||| ||| ||| |||||| | Sbjct 43769 ATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGG 43828 Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGT 110933 |||| | | |||||| ||||| ||| ||| ||| |||| | ||| |||| || Sbjct 43829 TGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCT-TGAGAGT 43887 Query 110934 ACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTG 110993 | |||||||| || || || |||| || | || | ||||| || | | ||| Sbjct 43888 GTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTG 43947 Query 110994 AGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGA 111053 || || || || || ||||| | || || | |||||| | || || || Sbjct 43948 GGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGA 44007 Query 111054 CATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAAC 111113 |||| ||||| || ||||| || | || |||| ||||| ||||| | ||||| Sbjct 44008 CATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAAC 44067 Query 111114 TCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACT 111173 ||||||| ||| | || || ||||| | || |||| | || | | ||| Sbjct 44068 ACGCATGATCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCGAAGCAAGTATGA 44127 Query 111174 CTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 | |||| || ||||||| |||||| ||| Sbjct 44128 CCTCTCCAGTGTCTTGAAACCAAAATAT 44155 Score = 93.3 bits (102), Expect = 5e-14 Identities = 299/461 (65%), Gaps = 10/461 (2%) Strand=Plus/Plus Query 109398 CGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATG 109457 ||||| || || || || ||||| || || ||||||||| |||||| || | || Sbjct 42356 CGCCTGCGTACGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTG 42415 Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTG 109517 ||| || | || ||| | || || || ||| | ||||| |||||| ||||| Sbjct 42416 CATGGAGGTGATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTG 42475 Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTC 109574 |||||||| || || ||||| ||||| | | ||| | | || | ||| || Sbjct 42476 GTCGATGAAAGCGCCGCGGTCAGCAGCCATCTGCACAATGGTGCGCT---GCGAAATCTC 42532 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634 |||||| |||||||| | | |||||| ||||||||||||| || | || ||||| Sbjct 42533 CCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGGAATATCCTGGATAGA 42592 Query 109635 GCCA--CCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTG 109692 |||| ||| | | || | | |||||| | | ||||| | || | || | Sbjct 42593 GCCATTGCAGGC--AATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGACG 42650 Query 109693 AGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGG 109752 || || | | ||| |||||| || || ||||| || || || || | Sbjct 42651 AGGTCCTTGAGAAGCCAGGGGTTGACGACCTGGAACTCACCGGCGAGGACACGGCGCGAG 42710 Query 109753 TAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAA 109812 |||||||| | ||||| || |||||||| || ||| ||| || || || || || Sbjct 42711 TAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCGAGAATCTGGCTGGTCGAG 42770 Query 109813 GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || || ||||| || || | ||| | ||||| || | ||| Sbjct 42771 GCAGTCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACC 42811 >seq1080 Length=47474 Score = 109 bits (120), Expect = 6e-19 Identities = 225/331 (68%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 11664 CGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGC 11723 || |||| ||| || | ||||| || || |||||||| | ||| || || ||| Sbjct 37541 CGCACGCGACTTTCCAATGGCGTCGATTTCGTCGATGAAGATGATGCAGGGCGTGTTCTT 37482 Query 11724 ACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAAC 11783 | |||| |||| | ||||| |||||| | || ||||| || |||||||| | Sbjct 37481 TCTTGCCGTCGCGAACAAGTCACGAACACGCGAAGGACCCACACCCACAAACATCTCGAT 37422 Query 11784 GAAGTTTGCG--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGA 11841 ||| | | | || || | ||||| |||||||||| ||||| || || | || Sbjct 37421 GAATTCGGAGCCGCTGA-CGCTGAA-GAAGGGAACAGCCGACTCTCCTGCCGTAGCCTTG 37364 Query 11842 GCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTG 11901 ||||| | ||||||||| |||||||||| ||||| |||| ||| ||||| || |||||| Sbjct 37363 GCGAGCAAAGTCTTACCGGTACCAGGTGGACCAGACAGAATGGCACCACGAGGAATCTTG 37304 Query 11902 GCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCC 11961 ||||| | ||| | || |||||||||||| || | |||| | ||| Sbjct 37303 GCACCTAACCGTTGGTACACACCGGGGTTCTTGAGGAAGCTAACGAACTCCATGATTTCT 37244 Query 11962 TCCTTGGCGGAGTCGATACCCTCAACATCGG 11992 | ||| || ||| || ||| | ||||||| Sbjct 37243 TGCTTTGCCTCGTCCATGCCCGCCACATCGG 37213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588966127289800