Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq546 168 8e-37
seq1080 109 6e-19
>seq546
Length=57559
Score = 168 bits (186), Expect = 8e-37
Identities = 596/928 (64%), Gaps = 11/928 (1%)
Strand=Plus/Plus
Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340
|| ||||| | ||| || | |||||| |||| | ||| || | ||||| || | |
Sbjct 43232 GGAAGAGCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACA 43291
Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400
|| || || | |||||| || |||| || | ||||||||| || ||| |
Sbjct 43292 ATCTCGCAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 43351
Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460
||||| |||||||| |||||||| | || | || || || ||||| | || ||| |||
Sbjct 43352 TTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATG 43411
Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTG 110520
|| | ||| | | |||| |||| || || | | | |||||| |||||| |
Sbjct 43412 GCATACCACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTC 43471
Query 110521 GTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGA 110580
||| | ||||| || || | |||||||| || | ||||||| |||| || ||
Sbjct 43472 TCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGG 43531
Query 110581 CAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCAC 110640
|| ||||| | ||| | || | ||| || | |||||||||||| || |||||||||
Sbjct 43532 CAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCAC 43591
Query 110641 ATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCC 110700
| ||| | || ||||| || || |||| || | || ||||| ||| || ||
Sbjct 43592 AACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCG 43651
Query 110701 AAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGA 110760
| ||| | || || | |||||| || || || |||| || | | || | ||
Sbjct 43652 AGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACC---AGGA 43708
Query 110761 CG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814
|| || | |||| || ||||| || ||| ||| |||| | |||||| |||
Sbjct 43709 CGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGA 43768
Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874
|| | || | ||| ||| || || || ||| ||| ||| |||||| |
Sbjct 43769 ATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGG 43828
Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGT 110933
|||| | | |||||| ||||| ||| ||| ||| |||| | ||| |||| ||
Sbjct 43829 TGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCT-TGAGAGT 43887
Query 110934 ACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTG 110993
| |||||||| || || || |||| || | || | ||||| || | | |||
Sbjct 43888 GTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTG 43947
Query 110994 AGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGA 111053
|| || || || || ||||| | || || | |||||| | || || ||
Sbjct 43948 GGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGA 44007
Query 111054 CATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAAC 111113
|||| ||||| || ||||| || | || |||| ||||| ||||| | |||||
Sbjct 44008 CATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAAC 44067
Query 111114 TCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACT 111173
||||||| ||| | || || ||||| | || |||| | || | | |||
Sbjct 44068 ACGCATGATCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCGAAGCAAGTATGA 44127
Query 111174 CTTCTCTAGGGTCTTGAGACCAAAGTAT 111201
| |||| || ||||||| |||||| |||
Sbjct 44128 CCTCTCCAGTGTCTTGAAACCAAAATAT 44155
Score = 93.3 bits (102), Expect = 5e-14
Identities = 299/461 (65%), Gaps = 10/461 (2%)
Strand=Plus/Plus
Query 109398 CGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATG 109457
||||| || || || || ||||| || || ||||||||| |||||| || | ||
Sbjct 42356 CGCCTGCGTACGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTG 42415
Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTG 109517
||| || | || ||| | || || || ||| | ||||| |||||| |||||
Sbjct 42416 CATGGAGGTGATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTG 42475
Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTC 109574
|||||||| || || ||||| ||||| | | ||| | | || | ||| ||
Sbjct 42476 GTCGATGAAAGCGCCGCGGTCAGCAGCCATCTGCACAATGGTGCGCT---GCGAAATCTC 42532
Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634
|||||| |||||||| | | |||||| ||||||||||||| || | || |||||
Sbjct 42533 CCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGGAATATCCTGGATAGA 42592
Query 109635 GCCA--CCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTG 109692
|||| ||| | | || | | |||||| | | ||||| | || | || |
Sbjct 42593 GCCATTGCAGGC--AATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGACG 42650
Query 109693 AGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGG 109752
|| || | | ||| |||||| || || ||||| || || || || |
Sbjct 42651 AGGTCCTTGAGAAGCCAGGGGTTGACGACCTGGAACTCACCGGCGAGGACACGGCGCGAG 42710
Query 109753 TAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAA 109812
|||||||| | ||||| || |||||||| || ||| ||| || || || || ||
Sbjct 42711 TAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCGAGAATCTGGCTGGTCGAG 42770
Query 109813 GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853
|| || ||||| || || | ||| | ||||| || | |||
Sbjct 42771 GCAGTCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACC 42811
>seq1080
Length=47474
Score = 109 bits (120), Expect = 6e-19
Identities = 225/331 (68%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 11664 CGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGC 11723
|| |||| ||| || | ||||| || || |||||||| | ||| || || |||
Sbjct 37541 CGCACGCGACTTTCCAATGGCGTCGATTTCGTCGATGAAGATGATGCAGGGCGTGTTCTT 37482
Query 11724 ACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAAC 11783
| |||| |||| | ||||| |||||| | || ||||| || |||||||| |
Sbjct 37481 TCTTGCCGTCGCGAACAAGTCACGAACACGCGAAGGACCCACACCCACAAACATCTCGAT 37422
Query 11784 GAAGTTTGCG--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGA 11841
||| | | | || || | ||||| |||||||||| ||||| || || | ||
Sbjct 37421 GAATTCGGAGCCGCTGA-CGCTGAA-GAAGGGAACAGCCGACTCTCCTGCCGTAGCCTTG 37364
Query 11842 GCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTG 11901
||||| | ||||||||| |||||||||| ||||| |||| ||| ||||| || ||||||
Sbjct 37363 GCGAGCAAAGTCTTACCGGTACCAGGTGGACCAGACAGAATGGCACCACGAGGAATCTTG 37304
Query 11902 GCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCC 11961
||||| | ||| | || |||||||||||| || | |||| | |||
Sbjct 37303 GCACCTAACCGTTGGTACACACCGGGGTTCTTGAGGAAGCTAACGAACTCCATGATTTCT 37244
Query 11962 TCCTTGGCGGAGTCGATACCCTCAACATCGG 11992
| ||| || ||| || ||| | |||||||
Sbjct 37243 TGCTTTGCCTCGTCCATGCCCGCCACATCGG 37213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588966127289800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |