Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq546 203 4e-47
seq496 96.9 4e-15
>seq546
Length=57559
Score = 203 bits (224), Expect = 4e-47
Identities = 567/868 (65%), Gaps = 13/868 (1%)
Strand=Plus/Plus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
||||| |||| || ||||||||||||||||| |||||| | | |||||||| | |
Sbjct 43232 GGAAGAGCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACA 43291
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
|| || || | |||||| || ||| || || | ||||| ||||| ||||| |
Sbjct 43292 ATCTCGCAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 43351
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
||||| ||||||||||||||||| |||| | || ||||| ||||| | || ||| ||
Sbjct 43352 TTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATG 43411
Query 106637 GCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTT 106696
|| | ||||| | ||| | || | || | || || ||| |||||| |
Sbjct 43412 GCATACCACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTC 43471
Query 106697 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA 106756
|||||| | || ||||| || || | |||||| ||||| || |||| || ||
Sbjct 43472 TCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGG 43531
Query 106757 CAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 106816
|| || |||| ||||| ||| | ||| || ||||||||||| || || |||||||||
Sbjct 43532 CAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCAC 43591
Query 106817 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 106876
| | ||||||| || | || |||| || | || ||||| || | ||
Sbjct 43592 AACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCG 43651
Query 106877 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGA 106936
||||| | || || |||||||| ||||| || |||| || | || || ||
Sbjct 43652 AGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACC---AGGA 43708
Query 106937 CGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 106990
||| ||| |||| | || ||||| || ||| ||| | || || ||||| |||
Sbjct 43709 CGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGA 43768
Query 106991 ATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACAT 107048
|| | || | || ||| || || || || || ||| | ||| | | |
Sbjct 43769 ATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCT--GTGGAACGAATAC 43826
Query 107049 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108
|||| || | ||||| || || ||| ||| || || ||||| | | ||||
Sbjct 43827 GGTGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAG 43886
Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168
| | || ||||| | ||| ||||||||| || |||| | |||||| | | ||
Sbjct 43887 TGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCT 43946
Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 107228
| || | || |||||||| ||||| | ||| || | || ||| | || || |
Sbjct 43947 GGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCG 44006
Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCA 107288
||||| | ||| || || | | || |||||||| |||||||| |||| || |
Sbjct 44007 ACATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAA 44066
Query 107289 CACGCATAAACATGTATTGGGGTGTTTC 107316
||||||| | ||||| || ||| ||||
Sbjct 44067 CACGCATGATCATGTGCTGCGGTCTTTC 44094
>seq496
Length=30664
Score = 96.9 bits (106), Expect = 4e-15
Identities = 288/439 (66%), Gaps = 18/439 (4%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| |||||||| |||||||||||||| || | || |||||| |||||
Sbjct 5825 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCCATG 5766
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACC--CCAACTTGTTTGAG 117098
||||| || || || ||| ||| | | | | || || ||| | ||
Sbjct 5765 AAGTCGAAGGGGTTGGTCGAGTTGTAGAACTTCTTGTTGCCAAGAGCCACC-------AG 5713
Query 117099 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 117158
|| || || | ||| |||| ||||||| | |||| || |||||| |||| ||
Sbjct 5712 CAGGCGGTCGGCAACAAACTCGATGTACTGGCACATGAGGGTAGCGTTCATGCCGAGCAG 5653
Query 117159 ATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218
|| || ||||| | |||| ||| ||| ||||| || ||||| | | |||
Sbjct 5652 GGCGACGGGAAGAGCGTCGGTAAGGAACTCTTGCTCCATCTCGACGGCCTCGGTGATGAT 5593
Query 117219 GGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAA 117277
| | ||| |||| | || || || | || ||||||| |||||
Sbjct 5592 CCTCTCCACAGTCTCGGGCGAAGG-CTTGGACTTGATGTGAGAGAAGAGCAGGCAGGCAA 5534
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| | ||||| || ||||| || || || || |||||| ||||| ||||
Sbjct 5533 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCA 5474
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396
| || || |||||||| | ||| | || | ||| ||| || ||| |||||||||||||
Sbjct 5473 TCAGGCCACGCTTCTTGAGCCAGAAGATGGACGC-GAAGGAACCGCTGAAGAAGATACCC 5415
Query 117397 TCCACACACGCAAACGCAA 117415
|| ||| ||||| ||||
Sbjct 5414 TCGACAGCAGCAAAGGCAA 5396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589970910446840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |