Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq731 145 2e-29 seq923 136 9e-27 seq670 111 3e-19 seq546 89.7 1e-12 >seq731 Length=88763 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || ||||| |||| ||| || | || || || Sbjct 88635 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCCTCA 88576 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| ||||| || |||||||| Sbjct 88575 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 88516 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||||||| || ||||| ||||| | ||||| Sbjct 88515 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCGAGGGTGATGGTCTTG 88456 Query 195112 CCTGT 195116 || || Sbjct 88455 CCGGT 88451 Score = 118 bits (130), Expect = 2e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| || || | || || || Sbjct 88351 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCA 88292 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || || ||||| || |||||||| || ||||| ||| Sbjct 88291 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 88232 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||| || || || |||||||| | ||||| Sbjct 88231 ATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 88172 Query 195112 CCTGT 195116 || || Sbjct 88171 CCGGT 88167 >seq923 Length=2568 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| || || || ||||| || | | || || ||||| ||||||||| Sbjct 304 TGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCATCCTCGAGCTGC 245 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || ||||||||||| | || || ||||| || || ||||| || ||||| ||||| || Sbjct 244 TTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTC 185 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| ||||| || |||||| ||| || || || || | ||||||||| ||| Sbjct 184 GACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGTCTTTCCGGTC 125 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 124 AGGGTCTTGACGAAGATCTGCAT 102 >seq670 Length=49272 Score = 111 bits (122), Expect = 3e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| || || | || || ||||||||||| || |||||||| Sbjct 38410 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 38469 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || |||||||| || ||||| || || || |||||| || || Sbjct 38470 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 38529 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||||||||| || || || ||||| | ||||| || |||| || || ||||| Sbjct 38530 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 38588 >seq546 Length=57559 Score = 89.7 bits (98), Expect = 1e-12 Identities = 190/281 (68%), Gaps = 16/281 (6%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 || ||||| | |||| | ||||||| ||||||||| | ||| | | || || || ||| Sbjct 43602 TTTTACGCGTTGTGGATTCCCGATCTGTTCATGAAGCGTGTGGAGCAAAACGGTGAATGG 43543 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || || || || | || || || || |||| || || || || |||||||||| Sbjct 43542 ACTCTCTTTTGCCCTCACGAGGCCCCGGGTCTTGCCGACGTGTACGGCGACGAGTTCGAG 43483 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGA---AG-----G 160760 || || || || ||||||| |||||| ||| ||||| || || | Sbjct 43482 GAGCTCTACGAGAGGTACGAAA----GGGAAG-GCCGT---GGTCGCGAGACAGTCCGCG 43431 Query 160761 CCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCG 160820 ||||| | |||||| || |||||| | || || |||| || | |||||||| Sbjct 43430 CCCAAAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAATCCCTTTATGC 43371 Query 160821 CATACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 ||||||||||| | |||||||| |||||||||||| Sbjct 43370 TCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 43330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109462537372547