Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq731 145 2e-29
seq923 136 9e-27
seq670 111 3e-19
seq546 89.7 1e-12
>seq731
Length=88763
Score = 145 bits (160), Expect = 2e-29
Identities = 143/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| |||| ||| || | || || ||
Sbjct 88635 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCCTCA 88576
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| ||||| ||||| || ||||||||
Sbjct 88575 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 88516
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||||||| || ||||| ||||| | |||||
Sbjct 88515 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCGAGGGTGATGGTCTTG 88456
Query 195112 CCTGT 195116
|| ||
Sbjct 88455 CCGGT 88451
Score = 118 bits (130), Expect = 2e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| |||| || || | || || ||
Sbjct 88351 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCA 88292
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||||||||| || || ||||| || |||||||| || ||||| |||
Sbjct 88291 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 88232
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || |||||||| || || || |||||||| | |||||
Sbjct 88231 ATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 88172
Query 195112 CCTGT 195116
|| ||
Sbjct 88171 CCGGT 88167
>seq923
Length=2568
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || || ||||| || || || ||||| || | | || || ||||| |||||||||
Sbjct 304 TGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCATCCTCGAGCTGC 245
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| ||||||||||| | || || ||||| || || ||||| || ||||| ||||| ||
Sbjct 244 TTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTC 185
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||||||| ||||| || |||||| ||| || || || || | ||||||||| |||
Sbjct 184 GACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGTCTTTCCGGTC 125
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 124 AGGGTCTTGACGAAGATCTGCAT 102
>seq670
Length=49272
Score = 111 bits (122), Expect = 3e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| || || | || || ||||||||||| || ||||||||
Sbjct 38410 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 38469
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| || |||||||| || ||||| || || || |||||| || ||
Sbjct 38470 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 38529
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
||||||||||| || || || ||||| | ||||| || |||| || || |||||
Sbjct 38530 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 38588
>seq546
Length=57559
Score = 89.7 bits (98), Expect = 1e-12
Identities = 190/281 (68%), Gaps = 16/281 (6%)
Strand=Plus/Minus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
|| ||||| | |||| | ||||||| ||||||||| | ||| | | || || || |||
Sbjct 43602 TTTTACGCGTTGTGGATTCCCGATCTGTTCATGAAGCGTGTGGAGCAAAACGGTGAATGG 43543
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| || || || || | || || || || |||| || || || || ||||||||||
Sbjct 43542 ACTCTCTTTTGCCCTCACGAGGCCCCGGGTCTTGCCGACGTGTACGGCGACGAGTTCGAG 43483
Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGA---AG-----G 160760
|| || || || ||||||| |||||| ||| ||||| || || |
Sbjct 43482 GAGCTCTACGAGAGGTACGAAA----GGGAAG-GCCGT---GGTCGCGAGACAGTCCGCG 43431
Query 160761 CCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCG 160820
||||| | |||||| || |||||| | || || |||| || | ||||||||
Sbjct 43430 CCCAAAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAATCCCTTTATGC 43371
Query 160821 CATACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861
||||||||||| | |||||||| ||||||||||||
Sbjct 43370 TCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 43330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109462537372547
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |