Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq838 123 2e-23
>seq838
Length=49465
Score = 123 bits (136), Expect = 2e-23
Identities = 421/660 (64%), Gaps = 56/660 (8%)
Strand=Plus/Minus
Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838
||||| | ||| | ||| |||||| | ||||| || || ||||||||||| |||||
Sbjct 13655 GGCTCGCGCTCCAACTGCACCTTCAGGGCCTCCACATGGTCGAGGTAGACGTGGGCGTCG 13596
Query 29839 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29898
|||| |||||| | | || || | || || |||||| |||| ||| | |||
Sbjct 13595 CCCATGGTGTGCGTTAGCGAGCCGGGCACCAGGTCGCAGACGTGCGCCAGCATATGCGTC 13536
Query 29899 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 29958
|| || | ||||||||| ||||| || || || |||||||||||||| | |||| |||
Sbjct 13535 AGCAGCGCGTAGCTGGCAATGTTGAAAGGCACGCCGAGCCCCATGTCGCAGGACCGTTGG 13476
Query 29959 T---AGAGC---TG----ACAC-----------GAGAGCTCTCCGTCG------------ 29985
| | ||| || || | || |||| || ||
Sbjct 13475 TACAACAGCGTGTGCAGAACGCCCTTTTGCTTGGATCCCTCTTCGCCGTTTTCGCCGCGC 13416
Query 29986 ---------------CTCACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCC 30027
||||| || ||||| | ||||| ||||| || || || |||
Sbjct 13415 TTGGCCGCGGGAAAGCTCACATAGAACTGCGCAAACATG---TGGCAAGGCGGCAGCGCC 13359
Query 30028 ATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTG 30087
|| || | ||||||||| |||| || ||||||||| | ||| || |||
Sbjct 13358 ATCTTCTTCAGTTGGGCGGGGTTCCACGCGCTCATGATGATGCGGCGGTCGAAAGGCTTG 13299
Query 30088 TTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC 30147
|| | | ||| | | | | |||||| || || || || | |||||| ||
Sbjct 13298 TTGCGCAGCTTGTCGATGACTTCGGCCAGCTGGTCGACGCCTTGTCCGGTGTAGTCGGCG 13239
Query 30148 CTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGG 30207
|||| ||||||| || || ||||||| ||| ||||| ||||| || ||||| |||
Sbjct 13238 TGGCAGTCCTTGTACTCGGCGCCAAAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGG 13179
Query 30208 TCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGC 30266
|| |||||||| | ||| || || || | |||||| ||| |||| || |||||| |
Sbjct 13178 TCGCCCTCTTCGCGGTG-TCCCAGTCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCC 13120
Query 30267 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAA 30326
||||||||| || | || || || ||| || ||| ||| || | |||
Sbjct 13119 GTCCCAGATTTTGATTCCTGCATCTGACAGCGGCTTCGAGGACGTGCTGCCCGAAATGAA 13060
Query 30327 CCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386
|||||||||||| | | |||||| | ||| || | |||||| ||||| || || ||
Sbjct 13059 CCACAGCAGCTCGGCAATGACGGCGCGCAGAAATACGCGCTTGGTGGTGAGAAGCGGCAA 13000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408610921783793
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |