Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq546 286 6e-72 seq496 215 1e-50 >seq546 Length=57559 Score = 286 bits (316), Expect = 6e-72 Identities = 1119/1735 (64%), Gaps = 66/1735 (4%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 |||||| ||||| |||||| ||||| | | | | |||||| ||||| | | || Sbjct 42458 GTTCAGCGACTGGGACTGGTCGATGAAAGCGCCGCGGTCAGCAGCCATCTGCACAATGGT 42517 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | ||| || | |||||| ||||||||| ||| | |||| ||| || || | | ||| Sbjct 42518 GCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGG 42577 Query 212816 GATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 || | ||| | ||| || || ||| | | | | ||||| || ||| Sbjct 42578 AATATCCTGGATAGAGCCATTGCAGGCAATGATACGGTTCTT---CATGTTGTCTGACCA 42634 Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932 | |||| | | ||| ||||| || |||||||| | |||||| ||||| | Sbjct 42635 CAAGCCCATCTCGACGAGGTCCTTGAGAAGCCAGGGGTTGACGACCTGGAACTCACCGGC 42694 Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992 ||| || | | | ||| | ||| || ||||| ||||||| | |||||| || || Sbjct 42695 GAGGACACGGCGCGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCGAG 42754 Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052 |||||| || ||| || ||||| || || || || | ||||||| ||| ||||| Sbjct 42755 AATCTGGCTGGTCGAGGCAGTCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTG 42814 Query 213053 CTCGCCGATGA--GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCC 213110 || | || | | | | ||||| ||||||||||| ||| || ||| Sbjct 42815 CTGAGCAATCTCTGACTTC-AGGCTCT-CCCAGTCCCAT-----AGATCCGTAGGGGTCT 42867 Query 213111 TTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAG 213170 | |||||||||||| |||||||||| |||| || || |||| ||||| Sbjct 42868 T----GTTCCACATGTCGTACTGCAAGATACCTTGAGAGACAGGCGATCCCTCGTAAGTC 42923 Query 213171 GAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATG 213230 ||||| || | || ||||||||||||| ||| ||| || || |||| ||||||| Sbjct 42924 TCGTAGGCACCGTTCTTCTTGGCCAGCTCGACGGAAGCCGTGAGAGC-GCGTGGTAGATG 42982 Query 213231 GTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCAT- 213289 ||||| || |||| ||||||| | | ||||||| || || ||| ||||| | Sbjct 42983 GTTTCGAAGATCTGTATGTTGAGTTGCCTGGCCTCGGGCGAGTCGAAAGGCATGCGAAGA 43042 Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 ||| |||| ||||||| || || | ||| |||| | ||||| | || | || ||| Sbjct 43043 GCGA-GGAATGCATCAGCAAGGCCGTTGACACCGACAGCAATGGGGCGATGGCGCATGTT 43101 Query 213350 AGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 ||| | ||| | ||||| |||| ||||||||||||||| | ||| Sbjct 43102 GCTCTTTCTGGCCTCGGGAACAGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTT 43161 Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG 213469 | | |||| | |||| | ||| | || | | | |||| | | | | | Sbjct 43162 GACGAGGACTTGGACAACATTGTGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATC 43221 Query 213470 CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGT 213529 ||||| ||| || |||| ||||| |||||||| || ||||| | || | || Sbjct 43222 AACAAAGGTAGGAAGAGCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGT 43281 Query 213530 GTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589 |||||| | |||||| ||| |||||| || || |||||||| ||||||| ||||| Sbjct 43282 GTACTCAACAATCTCGCAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTT 43341 Query 213590 TGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGA 213649 ||| |||| || ||||||||||||||| |||| |||||||| ||| | Sbjct 43342 GCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGC 43401 Query 213650 CACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCACC-CGCCTGACAGCTCCGGG 213706 | | || || ||| ||| || | ||| ||| | ||| ||| | || Sbjct 43402 CTCGAGGAT--GGCATACCACAGCTTTTGGGCGCGGACTGTCTCGC--GACCAC----GG 43453 Query 213707 CGTAGCCT--CGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGT 213764 | | ||| ||||| ||||||||||| | ||| |||| ||| | || | | || Sbjct 43454 CCTTCCCTTTCGTACCTCTCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGA 43513 Query 213765 CCCGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCA 213822 ||||| | || ||| || | ||| |||| || |||| | ||| || | || || Sbjct 43514 CCCGGGGCCTCGTGAGGG-CAAAAGAGAGTCCATTCACCGTTTTGCTCC-ACACGCTTCA 43571 Query 213823 TGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTC 213882 ||||||| || || | ||||| |||| || ||||| | | | ||| ||| || Sbjct 43572 TGAACAGATCGGGAATCCACAACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTC 43631 Query 213883 CAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942 | ||| ||||| || || || ||| |||| ||| |||||||| ||||||| ||||| Sbjct 43632 CGTGGTTCTTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGA 43691 Query 213943 TGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCA----TG 213995 ||||||| || || | || | ||||| || ||||| | | | || | || || Sbjct 43692 TGGCAAAAGCACCAGGACGCTTGTTGCCACCTTGGTCGA----CGTAGCGAGCAGTGTTG 43747 Query 213996 TTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATAC 214055 ||| ||| || || | ||| | ||| |||||||| |||||||| || || || || Sbjct 43748 TTGTAGACTCGGAGCATGGGAATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAG 43807 Query 214056 GAGCCGGAGG--CCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGA 214113 ||||| | || | | | || | | |||| || || |||||||| |||||| | Sbjct 43808 GAGCCTGTGGAACGAATACGGTGGACGTTGAGA--CCAATTCCACCGGCCGTCTTGGAAA 43865 Query 214114 TCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCA 214173 |||| || || | | | ||| || || || | |||||||| || | | || | Sbjct 43866 TCATAGCACAAGTCTTGAGAGTGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGA 43925 Query 214174 GCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGG 214233 ||||||||| | ||||||||| ||| | |||| |||||| | |||||| || Sbjct 43926 TCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGG 43985 Query 214234 CATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGT 214293 |||| | | |||| | || | | | |||| || || ||| | | ||||| | Sbjct 43986 CATGAGTAAAGCACTTTTCCGACATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTT 44045 Query 214294 GCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTT 214353 |||||| | ||| | ||| | ||||||||| || || || || ||| Sbjct 44046 CGCCGTGGATACCGACAGCAACACGCATGATCATGTGCTGCGGTCTTTC---GGCAACTT 44102 Query 214354 TGGGGCCCTTG------AGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | ||| ||| |||| ||| || | |||||| |||||||| ||||| || Sbjct 44103 T---GCCATTGATGCGAAGCAAGTATGACCTCTCCAGTGTCTTGAAACCAAAATA 44154 >seq496 Length=30664 Score = 215 bits (238), Expect = 1e-50 Identities = 363/520 (70%), Gaps = 19/520 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || || | ||||| |||||||| ||||| || | | ||| ||||||||| Sbjct 5828 TGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCC 5769 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCA 47957 |||||| ||||||||||| | ||| || | | | ||| ||| | |||||| Sbjct 5768 ATGAAGTCGAAGGGGTTGGTCGAGTTGTAGAACTTCTTGTT--GCCAAGAGCCACCAGCA 5711 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || || || |||||||||| | |||||||||| ||||||||| | |||| Sbjct 5710 GGCGGTCGGCAACAAACTCGATGTACTGGCACATGAGGGTAGCGTTCATGCCGAGCAGGG 5651 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||||| | ||| | || || ||||| | ||| |||| ||||| || | ||| Sbjct 5650 CGACGGGAAGAGCGTCGGTAAGGAACTCTTGCTCCATCTCGACGGCCTCGGTGATGATCC 5591 Query 48078 GCTTAACGCGGGACTCTG----AGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATGC 48131 || || | ||| | ||| || | ||| | ||| | |||||| || Sbjct 5590 TCTCCACA---GTCTCGGGCGAAGGCTTGGACTTG---ATGTGAGAGA---AGAGCAGGC 5540 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 |||||||||| |||||| ||| ||||| ||| ||||||| ||||||||||| || | Sbjct 5539 AGGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGC 5480 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||||||| | || | || ||||||||||| || | |||||| || || |||||||| Sbjct 5479 CAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGA 5420 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 | ||||| || || || || || | || | | | || | | ||||||||| ||| Sbjct 5419 TACCCTCGACAGCAGCAAAGGCAATCAGACGGGATGCAAAGGTCGAGTTCTTGTCACAGA 5360 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| || |||||||| ||||| ||||||||||| || Sbjct 5359 TCCAGCGGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGG 5320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931517185181440