Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq546 206 5e-48 seq496 201 2e-46 >seq546 Length=57559 Score = 206 bits (228), Expect = 5e-48 Identities = 962/1510 (64%), Gaps = 48/1510 (3%) Strand=Plus/Plus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425 || ||||| | |||||||| ||||| | | |||| | || || ||| || || Sbjct 42912 CCCTCGTAAGTCTCGTAGGCACCGTTCTTCTTGGCCAGCTCGACGGAAGCCGTGAGAGC- 42970 Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAG 221485 |||||||||||||| || |||||| |||||||| | |||||||||| || ||| Sbjct 42971 GCGTGGTAGATGGTTTCGAAGATCTGTATGTTGAGTTGCCTGGCCTCGGGCGAGTCGAAA 43030 Query 221486 GGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTG 221545 ||||| || || | || | || || || || | || |||| | | ||||| | Sbjct 43031 GGCATGCGAAGAGCGAGGAATGCATCAGCAAGGCCGTTGACACCGACAGCAATGGGGCGA 43090 Query 221546 TGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTG 221605 || | | ||||| || || || || || || ||||| |||||| | ||| Sbjct 43091 TGGCGCATGTTGCTCTTTCTGGCCTCGGGAACAGGGTAGTGGTTGATGTCGATGATCTTG 43150 Query 221606 TTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAAC 221665 || | |||| || ||||| || || | | |||||||| | || Sbjct 43151 TTCAAGTTCTTGACGAGGACTTGGACAACATTGTGCAGCTTCTTG------------AAG 43198 Query 221666 TCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725 || | ||| || || || ||||| | || || | ||||| || || Sbjct 43199 TCATAGACGTTGTTCTGGACATCAACAAAGGTAGGAAGAGCGAGAGAGGCCAAATTGCAA 43258 Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785 || || ||||| || || |||| | ||||| ||||||||| || Sbjct 43259 ACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCGCAGCAGAGGTTGGAGCTGCGA 43318 Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845 ||||| || |||| || || || |||||| ||| ||| |||||||||||||||||| Sbjct 43319 ATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAG 43378 Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACC 221905 ||| ||| ||||| ||||||| | || || | ||| || | | ||||| || Sbjct 43379 GGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTTTGGGCGCGGACT 43438 Query 221906 GTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965 ||| || ||| | ||| | |||| |||| |||||| || |||| || Sbjct 43439 GTC-TCGCGACCACGGCCTTC--CCTTTCGTACCTCTCGTAGAGCTCCTCGAACTCGTCG 43495 Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GGACACATCAGACTCCAGTGCTTGTT 222024 |||||| | ||| | || || || ||| | | || || | ||| |||| | ||| Sbjct 43496 CCGTACACGTCGGCAAGACCCGGGG-CCTCGTGAGGGCAAAAGAGAGTCCATTCACCGTT 43554 Query 222025 GTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084 | | || | || |||||| || || || ||||||| ||| | |||||| || | | Sbjct 43555 TTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCGTAAAAGAGGTCGCGCGC 43614 Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144 || ||||||| |||| ||| || | || || | || || | ||||||||| Sbjct 43615 GCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCGTG 43674 Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCAT 222204 ||| |||||||| |||| ||| | ||| || || |||||||||||||| || || | | | Sbjct 43675 CCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTGTTGCCACCTTGGTCGA-CGT 43733 Query 222205 CCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263 ||| | |||| ||| || || | || | ||| |||||||| |||||||| Sbjct 43734 AGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGGCCGTTGGAGGTACCGTTGG 43793 Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC----ATGCCGATACCA 222319 |||| |||||| | || || | | ||| || ||| | || || ||| Sbjct 43794 TGCCAGCAATGTAGGAGCCTGTGGAAC---GAATAC-GGTGGACGTTGAGACCAATTCCA 43849 Query 222320 CCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAG 222379 ||||| || || ||||| || || ||||||||||||| || ||||| || | Sbjct 43850 CCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAATACCCTCGATGCTG 43909 Query 222380 TCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTA 222439 |||||||| | || | || || || || | | ||| | |||| || || ||||| Sbjct 43910 TCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTG 43969 Query 222440 AACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACG 222499 |||| ||||| ||| || |||||| | ||||||| | |||||| || | | Sbjct 43970 AACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCAACTTGTACGTTTCGAGG 44029 Query 222500 ACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGC 222559 | || | |||| || ||||| || | || | |||| ||||| ||| || Sbjct 44030 GCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCATGATCATGTGCTGCGGT 44089 Query 222560 CTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAAC 222616 || | | || || ||| || || |||| ||| || | ||||| |||||||| Sbjct 44090 CTTTCGGCAACTTTGCCATTGATGC--GA-AGCAAGTATGACCTCTCCAGTGTCTTGAAA 44146 Query 222617 CCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC--CGACT 222674 ||||| || | | || ||||| | | ||| || | ||||| || ||||| || | Sbjct 44147 CCAAAATATTGGTAGTTGAAGTCACGGTCGTAGACGATGGCGGAGTTGAGCTCATCGGCG 44206 Query 222675 TG-TGCTTTACGCTCAACTCGAAAAAGCG---CTCAGAC-ACGAGGGGAGCGTTCTCTTT 222729 || | | ||||| | ||| ||| || | | | | ||| | || | || Sbjct 44207 TGCTTCATTACG---ATGTCG----TGCGTCTCTTTGCCAATCATGGGCGAGTGTACCTT 44259 Query 222730 GGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAACGTGTCGGGAGT 222789 | | | |||||| || || |||||| | | | ||| | || || ||| | | || Sbjct 44260 GTTCTTGGGGTTCGTGTAGTTGTACAGGTCCGAGATGACTTCCGAAAACTTCTTCTTGGT 44319 Query 222790 CTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCAC 222849 |||||||| || ||||| ||||| || |||| |||| | | | ||||| ||||||| Sbjct 44320 TTGCTTGTGGAGGTTCGAGACGGCAATGCGAGCAGCCAGGGTGGCGTAGTCGGGGTGCAT 44379 Query 222850 GGTGGTCATG 222859 |||||||||| Sbjct 44380 GGTGGTCATG 44389 >seq496 Length=30664 Score = 201 bits (222), Expect = 2e-46 Identities = 351/516 (68%), Gaps = 9/516 (2%) Strand=Plus/Plus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| ||||||||| ||||| |||||| | |||||| | ||| | | || Sbjct 5320 CCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCCGCTGGATCTGTGACAAGAACTCGACC 5379 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| || ||| | |||||||||||||| ||||| ||||| ||||||||||| || Sbjct 5380 TTTGCATCCCGTCTGATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTC 5439 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989 ||| ||||||||||||||||| || || ||||| || || ||| ||||||||| Sbjct 5440 GCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAG 5499 Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCAC 26049 |||||| | | |||||||| | |||| || |||||||||||||||| | | ||| Sbjct 5500 CTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTC---TCAC 5556 Query 26050 TTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATC 26109 | ||| ||||| | ||||| || | || ||||||| ||||| || ||||| Sbjct 5557 ATCAAGTCCAAGCCTTCGCCCGAGACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATG 5616 Query 26110 GAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTC 26169 ||| | ||||| | | ||||||||| | ||| Sbjct 5617 GAGCAAGAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTC 5676 Query 26170 ATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAG 26228 ||| |||| ||||| |||| ||| ||||||| ||||| ||| | ||| | | || Sbjct 5677 ATGTGCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCTCTTGGCA---ACAAG 5733 Query 26229 A--CTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAG 26286 | |||||| || | ||||| |||||||| ||||| ||||| ||| | | || ||| Sbjct 5734 AAGTTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAG 5793 Query 26287 ACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 ||||||||||| || ||| | || || ||||| ||| Sbjct 5794 ACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAA 5829 Score = 87.8 bits (96), Expect = 3e-12 Identities = 163/236 (69%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| ||||||||| || |||||||||||| Sbjct 4937 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCTGAGGAGATTGATCTG 4996 Query 25537 GCCAAGGACATGGACGGCTGGTAC--GC-TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 |||||||| | | | |||| || || ||| || || || ||| ||| ||| Sbjct 4997 TCCAAGGACCTTCATGACTGGAACAAGCGTCT---GAATGATGACGAGCGTTTCTTCATC 5053 Query 25594 T---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| | || ||||| || || || || || || || |||||||| || |||| Sbjct 5054 TCTCACGTCCTTGCCTTCTTCGCTGCATCGGACGGCATTGTCAACGAGAACTTGGTCGAG 5113 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | |||| | || || ||| | ||||| || |||||||| |||||||| Sbjct 5114 CGCTTCAGCTCCGAGGTTCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGAT 5169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928829230239040