Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq546 206 5e-48
seq496 201 2e-46
>seq546
Length=57559
Score = 206 bits (228), Expect = 5e-48
Identities = 962/1510 (64%), Gaps = 48/1510 (3%)
Strand=Plus/Plus
Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425
|| ||||| | |||||||| ||||| | | |||| | || || ||| || ||
Sbjct 42912 CCCTCGTAAGTCTCGTAGGCACCGTTCTTCTTGGCCAGCTCGACGGAAGCCGTGAGAGC- 42970
Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAG 221485
|||||||||||||| || |||||| |||||||| | |||||||||| || |||
Sbjct 42971 GCGTGGTAGATGGTTTCGAAGATCTGTATGTTGAGTTGCCTGGCCTCGGGCGAGTCGAAA 43030
Query 221486 GGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTG 221545
||||| || || | || | || || || || | || |||| | | ||||| |
Sbjct 43031 GGCATGCGAAGAGCGAGGAATGCATCAGCAAGGCCGTTGACACCGACAGCAATGGGGCGA 43090
Query 221546 TGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTG 221605
|| | | ||||| || || || || || || ||||| |||||| | |||
Sbjct 43091 TGGCGCATGTTGCTCTTTCTGGCCTCGGGAACAGGGTAGTGGTTGATGTCGATGATCTTG 43150
Query 221606 TTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAAC 221665
|| | |||| || ||||| || || | | |||||||| | ||
Sbjct 43151 TTCAAGTTCTTGACGAGGACTTGGACAACATTGTGCAGCTTCTTG------------AAG 43198
Query 221666 TCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725
|| | ||| || || || ||||| | || || | ||||| || ||
Sbjct 43199 TCATAGACGTTGTTCTGGACATCAACAAAGGTAGGAAGAGCGAGAGAGGCCAAATTGCAA 43258
Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785
|| || ||||| || || |||| | ||||| ||||||||| ||
Sbjct 43259 ACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCGCAGCAGAGGTTGGAGCTGCGA 43318
Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845
||||| || |||| || || || |||||| ||| ||| ||||||||||||||||||
Sbjct 43319 ATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAG 43378
Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACC 221905
||| ||| ||||| ||||||| | || || | ||| || | | ||||| ||
Sbjct 43379 GGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTTTGGGCGCGGACT 43438
Query 221906 GTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965
||| || ||| | ||| | |||| |||| |||||| || |||| ||
Sbjct 43439 GTC-TCGCGACCACGGCCTTC--CCTTTCGTACCTCTCGTAGAGCTCCTCGAACTCGTCG 43495
Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GGACACATCAGACTCCAGTGCTTGTT 222024
|||||| | ||| | || || || ||| | | || || | ||| |||| | |||
Sbjct 43496 CCGTACACGTCGGCAAGACCCGGGG-CCTCGTGAGGGCAAAAGAGAGTCCATTCACCGTT 43554
Query 222025 GTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084
| | || | || |||||| || || || ||||||| ||| | |||||| || | |
Sbjct 43555 TTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCGTAAAAGAGGTCGCGCGC 43614
Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144
|| ||||||| |||| ||| || | || || | || || | |||||||||
Sbjct 43615 GCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCGTG 43674
Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCAT 222204
||| |||||||| |||| ||| | ||| || || |||||||||||||| || || | | |
Sbjct 43675 CCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTGTTGCCACCTTGGTCGA-CGT 43733
Query 222205 CCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263
||| | |||| ||| || || | || | ||| |||||||| ||||||||
Sbjct 43734 AGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGGCCGTTGGAGGTACCGTTGG 43793
Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC----ATGCCGATACCA 222319
|||| |||||| | || || | | ||| || ||| | || || |||
Sbjct 43794 TGCCAGCAATGTAGGAGCCTGTGGAAC---GAATAC-GGTGGACGTTGAGACCAATTCCA 43849
Query 222320 CCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAG 222379
||||| || || ||||| || || ||||||||||||| || ||||| || |
Sbjct 43850 CCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAATACCCTCGATGCTG 43909
Query 222380 TCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTA 222439
|||||||| | || | || || || || | | ||| | |||| || || |||||
Sbjct 43910 TCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTG 43969
Query 222440 AACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACG 222499
|||| ||||| ||| || |||||| | ||||||| | |||||| || | |
Sbjct 43970 AACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCAACTTGTACGTTTCGAGG 44029
Query 222500 ACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGC 222559
| || | |||| || ||||| || | || | |||| ||||| ||| ||
Sbjct 44030 GCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCATGATCATGTGCTGCGGT 44089
Query 222560 CTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAAC 222616
|| | | || || ||| || || |||| ||| || | ||||| ||||||||
Sbjct 44090 CTTTCGGCAACTTTGCCATTGATGC--GA-AGCAAGTATGACCTCTCCAGTGTCTTGAAA 44146
Query 222617 CCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC--CGACT 222674
||||| || | | || ||||| | | ||| || | ||||| || ||||| || |
Sbjct 44147 CCAAAATATTGGTAGTTGAAGTCACGGTCGTAGACGATGGCGGAGTTGAGCTCATCGGCG 44206
Query 222675 TG-TGCTTTACGCTCAACTCGAAAAAGCG---CTCAGAC-ACGAGGGGAGCGTTCTCTTT 222729
|| | | ||||| | ||| ||| || | | | | ||| | || | ||
Sbjct 44207 TGCTTCATTACG---ATGTCG----TGCGTCTCTTTGCCAATCATGGGCGAGTGTACCTT 44259
Query 222730 GGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAACGTGTCGGGAGT 222789
| | | |||||| || || |||||| | | | ||| | || || ||| | | ||
Sbjct 44260 GTTCTTGGGGTTCGTGTAGTTGTACAGGTCCGAGATGACTTCCGAAAACTTCTTCTTGGT 44319
Query 222790 CTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCAC 222849
|||||||| || ||||| ||||| || |||| |||| | | | ||||| |||||||
Sbjct 44320 TTGCTTGTGGAGGTTCGAGACGGCAATGCGAGCAGCCAGGGTGGCGTAGTCGGGGTGCAT 44379
Query 222850 GGTGGTCATG 222859
||||||||||
Sbjct 44380 GGTGGTCATG 44389
>seq496
Length=30664
Score = 201 bits (222), Expect = 2e-46
Identities = 351/516 (68%), Gaps = 9/516 (2%)
Strand=Plus/Plus
Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869
||| ||||||||| ||||| |||||| | |||||| | ||| | | ||
Sbjct 5320 CCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCCGCTGGATCTGTGACAAGAACTCGACC 5379
Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929
|||| || ||| | |||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct 5380 TTTGCATCCCGTCTGATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTC 5439
Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989
||| ||||||||||||||||| || || ||||| || || ||| |||||||||
Sbjct 5440 GCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAG 5499
Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCAC 26049
|||||| | | |||||||| | |||| || |||||||||||||||| | | |||
Sbjct 5500 CTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTC---TCAC 5556
Query 26050 TTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATC 26109
| ||| ||||| | ||||| || | || ||||||| ||||| || |||||
Sbjct 5557 ATCAAGTCCAAGCCTTCGCCCGAGACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATG 5616
Query 26110 GAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTC 26169
||| | ||||| | | ||||||||| | |||
Sbjct 5617 GAGCAAGAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTC 5676
Query 26170 ATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAG 26228
||| |||| ||||| |||| ||| ||||||| ||||| ||| | ||| | | ||
Sbjct 5677 ATGTGCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCTCTTGGCA---ACAAG 5733
Query 26229 A--CTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAG 26286
| |||||| || | ||||| |||||||| ||||| ||||| ||| | | || |||
Sbjct 5734 AAGTTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAG 5793
Query 26287 ACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
||||||||||| || ||| | || || ||||| |||
Sbjct 5794 ACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAA 5829
Score = 87.8 bits (96), Expect = 3e-12
Identities = 163/236 (69%), Gaps = 9/236 (4%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | ||| ||||||||| || ||||||||||||
Sbjct 4937 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCTGAGGAGATTGATCTG 4996
Query 25537 GCCAAGGACATGGACGGCTGGTAC--GC-TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
|||||||| | | | |||| || || ||| || || || ||| ||| |||
Sbjct 4997 TCCAAGGACCTTCATGACTGGAACAAGCGTCT---GAATGATGACGAGCGTTTCTTCATC 5053
Query 25594 T---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650
| |||| | || ||||| || || || || || || || |||||||| || ||||
Sbjct 5054 TCTCACGTCCTTGCCTTCTTCGCTGCATCGGACGGCATTGTCAACGAGAACTTGGTCGAG 5113
Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
| |||| | || || ||| | ||||| || |||||||| ||||||||
Sbjct 5114 CGCTTCAGCTCCGAGGTTCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGAT 5169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928829230239040
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