Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq546 176 5e-39 seq496 96.9 4e-15 >seq546 Length=57559 Score = 176 bits (194), Expect = 5e-39 Identities = 561/868 (65%), Gaps = 13/868 (1%) Strand=Plus/Minus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| || ||| ||||| ||||||| || || |||| |||||||| |||||||| Sbjct 44094 GAAAGACCGCAGCACATGATCATGCGTGTTGCTGTCGGTATCCACGGCGAAGACATAACG 44035 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 75325 || | | || || ||| | |||||| || || | ||| || | || ||| Sbjct 44034 AGTGCCCTCGAAACGTACAAGTTGATGTCGGAAAAGTGCTTTACTCATGCCTCCCCCACC 43975 Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 | ||||| |||||||| || | || ||| | | |||||| | |||| || ||| Sbjct 43974 TTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAG 43915 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 |||||| ||| | ||||| || | ||||| | | ||||| || || ||| | Sbjct 43914 GAGGACAGCATCGAGGGTATTTACGACACTCTCAAGACTTGTGCTATGATTTCCAAGACG 43855 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGG 75503 || || || ||||| | || |||| | | | ||| | ||| || || | Sbjct 43854 GCCGGTGGAATTGGTCTCAACGTCCACCGTATTCGTTCCAC--AGGCTCCTACATTGCTG 43797 Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563 | || || ||| || | || | ||||| ||||| || || | ||| ||| || | Sbjct 43796 GCACCAACGGTACCTCCAACGGCCTGATTCCCATGCTCCGAGTCTACAACAACACTGCTC 43737 Query 75564 GCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617 |||| || | |||| || ||||| || | | || ||||| |||| | Sbjct 43736 GCTACGTCGACCAAGGTGGCAACAAGCGTCCT---GGTGCTTTTGCCATCTACCTGGAGC 43680 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 | ||||| || || || | ||||| || | || ||||| || | || |||| Sbjct 43679 CTTGGCACGCTGACGTCTTCCCCTTCCTCGACCTTCGCAAGAACCACGGAAAGGAGGAGG 43620 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || | || ||||||| | |||||||||| || || ||||||||||| || | Sbjct 43619 TCCGCGCGCGCGACCTCTTTTACGCGTTGTGGATTCCCGATCTGTTCATGAAGCGTGTGG 43560 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 || | ||| ||||| |||| || || || || |||| || ||||| |||||| | Sbjct 43559 AGCAAAACGGTGAATGGACTCTCTTTTGCCCTCACGAGGCCCCGGGTCTTGCCGACGTGT 43500 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 || || ||||| || | |||||| | ||| ||| ||| || | | | || Sbjct 43499 ACGGCGACGAGTTCGAGGAGCTCTACGAGAGGTACGAAAGGGAAGGCCGTGGTCGCGAGA 43440 Query 75858 CTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 | || | ||| | | ||| | || || ||| | | ||||| ||||| || | | Sbjct 43439 CAGTCCGCGCCCAAAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAATC 43380 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | | |||||| |||||||||||||| ||| ||||| ||||| ||||| | || || | Sbjct 43379 CCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCA 43320 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 | ||||| || || ||| || ||| | |||||||| | | |||||| |||| Sbjct 43319 TTCGCAGCTCCAACCTCTGCTGCGAGATTGTTGAGTACACGGCTCCTGATGAGGTTGCTG 43260 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCC 76065 ||||||||||||| || |||| ||||| Sbjct 43259 TTTGCAATTTGGCCTCTCTCGCTCTTCC 43232 >seq496 Length=30664 Score = 96.9 bits (106), Expect = 4e-15 Identities = 288/439 (66%), Gaps = 18/439 (4%) Strand=Plus/Plus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGG 65145 |||| ||||| ||| ||||||||||||||| ||| || ||| ||| | || | ||| Sbjct 5396 TTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTC-GCGTCCATCTTCTGG 5454 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 | |||||||| || || ||||| ||||| |||||| || || || || ||||| || Sbjct 5455 CTCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGAC 5514 Query 65206 GAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTC-AAGACTTTGCGTAATAGACCCAC 65264 ||||| | ||| || |||||| ||||||| || | || || || | Sbjct 5515 GAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCACATCAAGTCCAAG-CCTTC 5573 Query 65265 TACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTT 65324 |||| ||| | | ||| | | ||||| || ||||| ||| ||| |||| | Sbjct 5574 GCCCGAGACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTAC 5633 Query 65325 GGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGA 65384 ||||| || || || |||| |||||| || |||| | ||||||| || Sbjct 5634 CGACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGA 5693 Query 65385 GTATGTGTCGGATCGTCTCCTCAAACAAGTTGG--GGTGCCACCCA-----TTTGGAACG 65437 || ||| | || || || || | ||| || || | | | | ||| Sbjct 5694 GTTTGTTGCCGACCGCCTGCT-------GGTGGCTCTTGGCAACAAGAAGTTCTACAACT 5746 Query 65438 CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTG 65497 ||| || || || ||||| ||||| |||||| || | || |||||||||||||| | Sbjct 5747 CGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCG 5806 Query 65498 AGAAGCGAGTTGGGGACTA 65516 ||||||| ||||| ||||| Sbjct 5807 AGAAGCGTGTTGGTGACTA 5825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596559600002080