Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq546 176 5e-39
seq496 96.9 4e-15
>seq546
Length=57559
Score = 176 bits (194), Expect = 5e-39
Identities = 561/868 (65%), Gaps = 13/868 (1%)
Strand=Plus/Minus
Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265
|||| || ||| ||||| ||||||| || || |||| |||||||| ||||||||
Sbjct 44094 GAAAGACCGCAGCACATGATCATGCGTGTTGCTGTCGGTATCCACGGCGAAGACATAACG 44035
Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 75325
|| | | || || ||| | |||||| || || | ||| || | || |||
Sbjct 44034 AGTGCCCTCGAAACGTACAAGTTGATGTCGGAAAAGTGCTTTACTCATGCCTCCCCCACC 43975
Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385
| ||||| |||||||| || | || ||| | | |||||| | |||| || |||
Sbjct 43974 TTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAG 43915
Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445
|||||| ||| | ||||| || | ||||| | | ||||| || || ||| |
Sbjct 43914 GAGGACAGCATCGAGGGTATTTACGACACTCTCAAGACTTGTGCTATGATTTCCAAGACG 43855
Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGG 75503
|| || || ||||| | || |||| | | | ||| | ||| || || |
Sbjct 43854 GCCGGTGGAATTGGTCTCAACGTCCACCGTATTCGTTCCAC--AGGCTCCTACATTGCTG 43797
Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563
| || || ||| || | || | ||||| ||||| || || | ||| ||| || |
Sbjct 43796 GCACCAACGGTACCTCCAACGGCCTGATTCCCATGCTCCGAGTCTACAACAACACTGCTC 43737
Query 75564 GCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617
|||| || | |||| || ||||| || | | || ||||| |||| |
Sbjct 43736 GCTACGTCGACCAAGGTGGCAACAAGCGTCCT---GGTGCTTTTGCCATCTACCTGGAGC 43680
Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677
| ||||| || || || | ||||| || | || ||||| || | || ||||
Sbjct 43679 CTTGGCACGCTGACGTCTTCCCCTTCCTCGACCTTCGCAAGAACCACGGAAAGGAGGAGG 43620
Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737
|| | || ||||||| | |||||||||| || || ||||||||||| || |
Sbjct 43619 TCCGCGCGCGCGACCTCTTTTACGCGTTGTGGATTCCCGATCTGTTCATGAAGCGTGTGG 43560
Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797
|| | ||| ||||| |||| || || || || |||| || ||||| |||||| |
Sbjct 43559 AGCAAAACGGTGAATGGACTCTCTTTTGCCCTCACGAGGCCCCGGGTCTTGCCGACGTGT 43500
Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857
|| || ||||| || | |||||| | ||| ||| ||| || | | | ||
Sbjct 43499 ACGGCGACGAGTTCGAGGAGCTCTACGAGAGGTACGAAAGGGAAGGCCGTGGTCGCGAGA 43440
Query 75858 CTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917
| || | ||| | | ||| | || || ||| | | ||||| ||||| || | |
Sbjct 43439 CAGTCCGCGCCCAAAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAATC 43380
Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977
| | |||||| |||||||||||||| ||| ||||| ||||| ||||| | || || |
Sbjct 43379 CCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCA 43320
Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037
| ||||| || || ||| || ||| | |||||||| | | |||||| ||||
Sbjct 43319 TTCGCAGCTCCAACCTCTGCTGCGAGATTGTTGAGTACACGGCTCCTGATGAGGTTGCTG 43260
Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCC 76065
||||||||||||| || |||| |||||
Sbjct 43259 TTTGCAATTTGGCCTCTCTCGCTCTTCC 43232
>seq496
Length=30664
Score = 96.9 bits (106), Expect = 4e-15
Identities = 288/439 (66%), Gaps = 18/439 (4%)
Strand=Plus/Plus
Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGG 65145
|||| ||||| ||| ||||||||||||||| ||| || ||| ||| | || | |||
Sbjct 5396 TTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTC-GCGTCCATCTTCTGG 5454
Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205
| |||||||| || || ||||| ||||| |||||| || || || || ||||| ||
Sbjct 5455 CTCAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGAC 5514
Query 65206 GAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTC-AAGACTTTGCGTAATAGACCCAC 65264
||||| | ||| || |||||| ||||||| || | || || || |
Sbjct 5515 GAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCACATCAAGTCCAAG-CCTTC 5573
Query 65265 TACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTT 65324
|||| ||| | | ||| | | ||||| || ||||| ||| ||| |||| |
Sbjct 5574 GCCCGAGACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTAC 5633
Query 65325 GGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGA 65384
||||| || || || |||| |||||| || |||| | ||||||| ||
Sbjct 5634 CGACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGA 5693
Query 65385 GTATGTGTCGGATCGTCTCCTCAAACAAGTTGG--GGTGCCACCCA-----TTTGGAACG 65437
|| ||| | || || || || | ||| || || | | | | |||
Sbjct 5694 GTTTGTTGCCGACCGCCTGCT-------GGTGGCTCTTGGCAACAAGAAGTTCTACAACT 5746
Query 65438 CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTG 65497
||| || || || ||||| ||||| |||||| || | || |||||||||||||| |
Sbjct 5747 CGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCG 5806
Query 65498 AGAAGCGAGTTGGGGACTA 65516
||||||| ||||| |||||
Sbjct 5807 AGAAGCGTGTTGGTGACTA 5825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596559600002080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |