Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq960 105 2e-17 seq585 104 7e-17 seq622 87.8 5e-12 >seq960 Length=19030 Score = 105 bits (116), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATG-CACC 251489 ||||||| ||| || || || | || | || || |||| |||| | | || |||| Sbjct 12211 TGGACGCGGTAGGCGTCCGAGACTTCGAACAGACGCTCCTTCAAGAAG-GCGCTGGCACC 12269 Query 251490 GTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCT 251549 ||| |||||||| ||||| ||||||||||| |||||||| ||||||||||| | || | Sbjct 12270 GTGGGAAATCATGCAATCGCGCTCCATTTCTCCGAAACGCAGACCACCATCTCTGGCACG 12329 Query 251550 ACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTT 251609 ||||||| | || ||||| || ||| | || ||||| || ||| || ||| Sbjct 12330 ACCCTCGACGGGTTGACGGGTCAGAATCTGCACGGGACCACGGGCACGGGCGTGGATCTT 12389 Query 251610 ATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || | ||||| || |||||||||||| ||| || || | ||||| Sbjct 12390 GTCGTCGACCATGTGGCGAAGACGCTGGTAGTATGTCGGGCCCAAGAAGA 12439 Score = 87.8 bits (96), Expect = 5e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| || ||||||||| ||||| || || || |||||||||| |||||| | || Sbjct 12619 TGGGCAATGGTCATACGAGAAGGAATGGCGTGCGGGTTGATGATGAGGTCGGGGGTGAGA 12678 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 ||||| |||||| ||||| |||| | | || | | ||||| || ||||| || Sbjct 12679 CCATCCCGAGTGAATGGCATGTCCTCATGG-CGGTAGGTAATACCAATGGTACCCTTCTG 12737 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||| || |||||||||||||| Sbjct 12738 TCCGTGACGCGAGGCAAACTTATCACCAAT 12767 >seq585 Length=148504 Score = 104 bits (114), Expect = 7e-17 Identities = 191/280 (68%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 302564 TCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTT 302623 |||| | |||||||| ||||| | ||| |||||||| ||||||||| || || | Sbjct 71238 TCATGACGTCTTCCAAGGCCTTGACCAGACGGCGCTGAATGTAACCAGTTTCAGCAGTCT 71179 Query 302624 TTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCG 302683 | || || |||||||| ||||| |||||||| |||| || ||||| || | ||| | Sbjct 71178 TGACGGCAGTATCAATCAGACCCTCACGACCAGCCATGGCGTGGAAAAAGAACTCGGTAG 71119 Query 302684 GTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGA 302743 || || || | | | ||| | | ||| || || || || | ||||| | ||| Sbjct 71118 GTGTCAGTCCACGCAGGTACGAGTTTTGAACAAAGCCTCGGGCAGCTGGCGAGTAGTCAT 71059 Query 302744 ACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAA 302803 |||||||||||||||||| || | || | | || | || || ||||| || || | Sbjct 71058 CCTTGGTAAAGTGTGGCAGAGTGCGGTATTTGAAACCAAACGGAATGCGCTTGCCTTCGA 70999 Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 | ||| ||||| | | | |||| |||||||| || Sbjct 70998 CCGACTGTTGTCCGACCAAGGCCGTCATTTGCGAAATGTT 70959 Score = 96.9 bits (106), Expect = 1e-14 Identities = 121/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || ||||| |||| ||||| |||||| | |||||||||| Sbjct 72004 AGAATTTCCTTCAGACGAGGGACACCCAGGGTAACGTT---CTTGGAAGAAACACCAGCA 71948 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||| || || || || | || || | ||||||||||| ||| ||||| | Sbjct 71947 AAGTGGAAGGTGTTGAGCGTCATCTGCGTGGCGGGCTCACCAATGGATTGCGCCGCCAAG 71888 Query 301933 ATACCAACCATTTCTCCTGGTGCT-ACAATAGACTTCTTGTAG 301974 | |||||||||||| || || ||| ||||| | | | ||| || Sbjct 71887 ACACCAACCATTTCGCCAGG-GCTCACAATGGCCCTGTTGAAG 71846 >seq622 Length=83010 Score = 87.8 bits (96), Expect = 5e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 251497 ATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCG 251556 |||| ||| |||||||||||||| |||| ||| ||||| || ||||||| | ||||||| Sbjct 37738 ATCAGACAGTCACGCTCCATTTCTCCGAGACGTAGACCGCCGTCGCGAGAACGACCCTCG 37797 Query 251557 GCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTT 251616 | ||||| || ||||| | | |||||| | ||||| || ||| || | Sbjct 37798 GTTGGCTGGCGGGTGAGGATGGCACGAGGACCACGCGCACGGCTGTGCATCTTGTCTTGC 37857 Query 251617 ACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||||| |||||||| |||||| | ||| |||| ||||| Sbjct 37858 ACCATGTGCTTGAGCTTTTGGTAGTAGATGGGCCCGAAGAAGA 37900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471792311873917