Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq546 149 6e-31
seq923 100 3e-16
>seq546
Length=57559
Score = 149 bits (164), Expect = 6e-31
Identities = 474/720 (66%), Gaps = 29/720 (4%)
Strand=Plus/Plus
Query 139303 TCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361
|||||| | |||||||| || ||||| |||| | ||||| |||| | |||| | |
Sbjct 43463 TCGTACCTCTCGTAGAGCTCCTCGAACTCGT-CGCCGTACACGTCGGCAAGACCCGGGGC 43521
Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421
|| || ||| || | ||| | |||| | ||||| || || ||| |||||||||||||
Sbjct 43522 CTCGTGAGGGCAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATC 43581
Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481
||||||||||| ||| | | | |||||||| || ||| || |||
Sbjct 43582 GGGAATCCACAACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTT--C 43639
Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539
|| | | || ||||| || |||||||||||||| || ||||| |||||||| |
Sbjct 43640 TTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAA 43699
Query 139540 GCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596
|| || || ||||||||||| ||||||| || ||| || ||| | || ||
Sbjct 43700 GCACCAGGACGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGG 43759
Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTG-- 139650
| ||| || ||| ||| | | || |||||||||| | ||| ||| |||| |
Sbjct 43760 AGCATGGGAATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAA 43819
Query 139651 CGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACG 139710
||| ||| || || |||| || ||||| ||| | ||||| || | | |
Sbjct 43820 CGAATACGG------TGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCA 43873
Query 139711 CAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAA 139769
||| || | | || ||||| ||||| |||||||| |||| ||| || || ||
Sbjct 43874 CAAGTCTTG-AGAGTGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAA 43932
Query 139770 GCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGT 139829
|||||| | ||| || || || || || |||| || || || || ||
Sbjct 43933 GCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGT 43992
Query 139830 GAA-CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGT 139888
|| || || || ||||||||| | ||||||||||| ||| ||| || || ||||
Sbjct 43993 AAAGCACTT-TTCCGACATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGT 44051
Query 139889 GGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGA 139948
|||||||||||| || ||||| | ||| || || | |||||| || ||| | ||
Sbjct 44052 GGATACCGACAGCAACACGCATGATCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGA 44111
Query 139949 tttttttCA--GATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
| || || ||| |||| || |||||| | ||||| || |||||||| ||
Sbjct 44112 TGCGAAGCAAGTATGACC--TCTCCAGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTC 44169
>seq923
Length=2568
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || |||||||| || ||| | |
Sbjct 102 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 161
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 162 GATACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 221
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || || ||||| |||||| || | |||| || || |||
Sbjct 222 CAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAAC 281
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || || || ||||||
Sbjct 282 ATCCAGAAGGAGTCTACCCTGCATTTGGTG 311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449890058591480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |