Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq546 149 6e-31 seq923 100 3e-16 >seq546 Length=57559 Score = 149 bits (164), Expect = 6e-31 Identities = 474/720 (66%), Gaps = 29/720 (4%) Strand=Plus/Plus Query 139303 TCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 |||||| | |||||||| || ||||| |||| | ||||| |||| | |||| | | Sbjct 43463 TCGTACCTCTCGTAGAGCTCCTCGAACTCGT-CGCCGTACACGTCGGCAAGACCCGGGGC 43521 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 || || ||| || | ||| | |||| | ||||| || || ||| ||||||||||||| Sbjct 43522 CTCGTGAGGGCAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATC 43581 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481 ||||||||||| ||| | | | |||||||| || ||| || ||| Sbjct 43582 GGGAATCCACAACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTT--C 43639 Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 || | | || ||||| || |||||||||||||| || ||||| |||||||| | Sbjct 43640 TTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAA 43699 Query 139540 GCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 || || || ||||||||||| ||||||| || ||| || ||| | || || Sbjct 43700 GCACCAGGACGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGG 43759 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTG-- 139650 | ||| || ||| ||| | | || |||||||||| | ||| ||| |||| | Sbjct 43760 AGCATGGGAATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAA 43819 Query 139651 CGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACG 139710 ||| ||| || || |||| || ||||| ||| | ||||| || | | | Sbjct 43820 CGAATACGG------TGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCA 43873 Query 139711 CAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAA 139769 ||| || | | || ||||| ||||| |||||||| |||| ||| || || || Sbjct 43874 CAAGTCTTG-AGAGTGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAA 43932 Query 139770 GCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGT 139829 |||||| | ||| || || || || || |||| || || || || || Sbjct 43933 GCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGT 43992 Query 139830 GAA-CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGT 139888 || || || || ||||||||| | ||||||||||| ||| ||| || || |||| Sbjct 43993 AAAGCACTT-TTCCGACATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGT 44051 Query 139889 GGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGA 139948 |||||||||||| || ||||| | ||| || || | |||||| || ||| | || Sbjct 44052 GGATACCGACAGCAACACGCATGATCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGA 44111 Query 139949 tttttttCA--GATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 | || || ||| |||| || |||||| | ||||| || |||||||| || Sbjct 44112 TGCGAAGCAAGTATGACC--TCTCCAGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTC 44169 >seq923 Length=2568 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || |||||||| || ||| | | Sbjct 102 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 161 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 162 GATACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 221 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || ||||| |||||| || | |||| || || ||| Sbjct 222 CAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAAC 281 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || || || |||||| Sbjct 282 ATCCAGAAGGAGTCTACCCTGCATTTGGTG 311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449890058591480