Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq496 183 5e-40 seq303 167 4e-35 seq546 147 3e-29 seq642 104 4e-16 seq852 91.5 2e-12 >seq496 Length=30664 Score = 183 bits (202), Expect = 5e-40 Identities = 234/319 (73%), Gaps = 10/319 (3%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | || Sbjct 5842 TGACACCGGCCTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGTTGA 5783 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| || |||| ||||| | || | Sbjct 5782 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTCGAGTTGTAGAACTTCTTGTTGCCAA 5723 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | |||||||||||||| || || || ||||||||||||||||||| ||||||| Sbjct 5722 GAGCCACCAGCAGGCGGTCGGCAACAAACTCGATGTACTGGCACATGAGGGTAGCGTTCA 5663 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| || || ||||| || | ||| | | ||||||| ||| ||||||||||||| Sbjct 5662 TGCCGAGCAGGGCGACGGGAAGAGCGTCGGTAAGGAACTCTTGCTCCATCTCGACGGCCT 5603 Query 794131 CGATGATGATCTGCCTGGGCAC---GTCGGACGACGGCTTGTCGAC--GAGCATCGTGTA 794185 || ||||||| ||| ||| |||| ||| |||||| ||| || | | | Sbjct 5602 CGGTGATGAT---CCTCTCCACAGTCTCGGGCGAAGGCTTG--GACTTGATGTGAGAGAA 5548 Query 794186 GAGCAGGCAGGCAAAGTCG 794204 ||||||||||||||||||| Sbjct 5547 GAGCAGGCAGGCAAAGTCG 5529 >seq303 Length=7887 Score = 167 bits (184), Expect = 4e-35 Identities = 347/504 (69%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 2411475 GTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCC 2411534 |||||||||| |||||| || || | || || ||||| | ||| || || Sbjct 5398 GTAGCCCAGCTTCGGCAGCGCCTCCTTGGCGAGCGCGAAAATCTTCCTCTGATCCACACC 5339 Query 2411535 GCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAC 2411594 || || || ||||||||||||||| ||||||||| ||||||||||| |||||||||| Sbjct 5338 ACCGAATTGTACGTCGACGTCGAGGTACTGCTCGTCCAGGGCCTGCATCAGCGGGTAGAT 5279 Query 2411595 GAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCTGGGCGGCGGCC--TTTTG 2411651 |||| ||| | |||||| | || | |||||| |||| ||| | ||| || | Sbjct 5278 GAGGCCAGACAGCAGGGGGTTGTCCGT-CTGCTTGACAACCTCGGCACCAGCCCTCTTCG 5220 Query 2411652 CGCCGTGC-CGACGGTCACGCGCGCCGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGG-CG 2411709 || ||||| || ||||| | | || |||| |||| ||||| | | ||||| ||| || Sbjct 5219 CGTCGTGCTCGGTGGTCATG-GTGC--TCAGCCGCAGCAGGTCCATCATGTAGTCGGACG 5163 Query 2411710 CCATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAATGTGC 2411769 | | ||||| |||||||| ||||||| || || || || | || ||||| | | | Sbjct 5162 AC-TTTTGGTACTCGCTGCCCAGCACAAACTCCAGCCGGTCGACCGACACGCCCACGGCC 5104 Query 2411770 TGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGCTCGACGAGGTCCCAC 2411829 | || | | | || |||||| ||| | | ||||| | |||||| || Sbjct 5103 TTCAGGCTCTCTGTTATCACAAACTTGTAGTACTTGGCGCGGTGGTTGACGAGCTCAATT 5044 Query 2411830 GGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACAT 2411889 |||| |||| || |||||| ||||| | |||||||| | ||| | || |||| Sbjct 5043 GGCGCCTTGAGGTTATCGAGGAACGCGTGGATGTCGGCAAGCAAGATTTTGACGTGACAG 4984 Query 2411890 CCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCC-CAGATGGGGCTT 2411948 || ||||| || || | || | || | || |||||||||||||| ||| |||| | Sbjct 4983 CCCGCCTGCAGGAACTGCGCAATCTTCAGCATCGGCACAAAGTAGCCGCAGTGCGGGCGT 4924 Query 2411949 GCCCGTCGGCGCGGTGCCCCAATA 2411972 ||||||| ||| |||||||| || Sbjct 4923 -CCCGTCGTCGCTGTGCCCCAGTA 4901 >seq546 Length=57559 Score = 147 bits (162), Expect = 3e-29 Identities = 278/410 (68%), Gaps = 14/410 (3%) Strand=Plus/Plus Query 2071610 TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGG 2071669 ||||||| ||||||| ||||||||| | ||||| || ||||||| ||||| ||| Sbjct 43320 TGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGG 43379 Query 2071670 GCGCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAA--TTTGGCGCGCGGGCAC 2071727 | || |||||| |||| ||| || |||||| |||| | ||| | |||||| | Sbjct 43380 GATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTTTGGGCGCGGACT- 43438 Query 2071728 CGAGGTCCTCGCG----CGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGG 2071783 ||| ||||| ||||| | |||| | || || || Sbjct 43439 ----GTC-TCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTAGAGCTCCTCGAACTCGT 43493 Query 2071784 CGCCGTGGCAC-TCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCG 2071842 |||||| ||| ||| || || || |||||| ||||||||||| | ||| || ||| Sbjct 43494 CGCCGTA-CACGTCGGCAAGACCCGGGGCCTCGTGAGGGCAAAAGAGAGTCCATTCACCG 43552 Query 2071843 CCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGC 2071902 | |||| || ||| ||||| ||| |||||| |||||||||| |||||| Sbjct 43553 TTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCGTAAAAGAGGTCGCGC 43612 Query 2071903 GCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCG 2071962 || ||| ||||||||| ||||||||||| |||||||| || || || ||| ||| Sbjct 43613 GCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCG 43672 Query 2071963 TGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||| |||||||||||| |||||| || || |||||| ||| || Sbjct 43673 TGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTGTTGCCACC 43722 Score = 113 bits (124), Expect = 7e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 |||||||| ||||| || |||| ||| |||| ||||||||||| | ||||||||||| Sbjct 43724 TGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGGCCGTTGGAG 43783 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||||||||| || | ||||| ||| | || || | ||| || | || Sbjct 43784 GTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGGTGGACGTTGAGACCA 43843 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||||| |||||| || | || || | || || || ||||| || |||||| Sbjct 43844 ATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAATACCCTCG 43903 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755 || ||| |||||||||| | || ||||| || Sbjct 43904 ATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGA 43938 >seq642 Length=60501 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || |||||||| || |||||| | || || || | || |||||||||||||||||| Sbjct 13405 GCTGCGAACTACCTGGATATCAAGGCTCTGCTGGACGTCGGTTGCAAGACCGTGGCCAAC 13464 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||||||||| || || ||||| ||||| || ||||| || ||| Sbjct 13465 ATGATCAAGGGCAAGTCGCCGGACGAAATCCGGAAGACTTTCAACATTCAGAACG 13519 >seq852 Length=55362 Score = 91.5 bits (100), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||||||||| |||||||||||| ||||||| || ||| ||| Sbjct 49723 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGCAG 49782 Query 1485531 GATCAGGCGCACG 1485543 ||||| || ||| Sbjct 49783 GATCAACCGAACG 49795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916103751713699