Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq496 183 5e-40
seq303 167 4e-35
seq546 147 3e-29
seq642 104 4e-16
seq852 91.5 2e-12
>seq496
Length=30664
Score = 183 bits (202), Expect = 5e-40
Identities = 234/319 (73%), Gaps = 10/319 (3%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | ||
Sbjct 5842 TGACACCGGCCTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGTTGA 5783
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
|||| || |||||| | ||| ||||||| || |||| ||||| | || |
Sbjct 5782 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTCGAGTTGTAGAACTTCTTGTTGCCAA 5723
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | |||||||||||||| || || || ||||||||||||||||||| |||||||
Sbjct 5722 GAGCCACCAGCAGGCGGTCGGCAACAAACTCGATGTACTGGCACATGAGGGTAGCGTTCA 5663
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||||| || || ||||| || | ||| | | ||||||| ||| |||||||||||||
Sbjct 5662 TGCCGAGCAGGGCGACGGGAAGAGCGTCGGTAAGGAACTCTTGCTCCATCTCGACGGCCT 5603
Query 794131 CGATGATGATCTGCCTGGGCAC---GTCGGACGACGGCTTGTCGAC--GAGCATCGTGTA 794185
|| ||||||| ||| ||| |||| ||| |||||| ||| || | | |
Sbjct 5602 CGGTGATGAT---CCTCTCCACAGTCTCGGGCGAAGGCTTG--GACTTGATGTGAGAGAA 5548
Query 794186 GAGCAGGCAGGCAAAGTCG 794204
|||||||||||||||||||
Sbjct 5547 GAGCAGGCAGGCAAAGTCG 5529
>seq303
Length=7887
Score = 167 bits (184), Expect = 4e-35
Identities = 347/504 (69%), Gaps = 12/504 (2%)
Strand=Plus/Minus
Query 2411475 GTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCC 2411534
|||||||||| |||||| || || | || || ||||| | ||| || ||
Sbjct 5398 GTAGCCCAGCTTCGGCAGCGCCTCCTTGGCGAGCGCGAAAATCTTCCTCTGATCCACACC 5339
Query 2411535 GCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAC 2411594
|| || || ||||||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct 5338 ACCGAATTGTACGTCGACGTCGAGGTACTGCTCGTCCAGGGCCTGCATCAGCGGGTAGAT 5279
Query 2411595 GAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCTGGGCGGCGGCC--TTTTG 2411651
|||| ||| | |||||| | || | |||||| |||| ||| | ||| || |
Sbjct 5278 GAGGCCAGACAGCAGGGGGTTGTCCGT-CTGCTTGACAACCTCGGCACCAGCCCTCTTCG 5220
Query 2411652 CGCCGTGC-CGACGGTCACGCGCGCCGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGG-CG 2411709
|| ||||| || ||||| | | || |||| |||| ||||| | | ||||| ||| ||
Sbjct 5219 CGTCGTGCTCGGTGGTCATG-GTGC--TCAGCCGCAGCAGGTCCATCATGTAGTCGGACG 5163
Query 2411710 CCATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAATGTGC 2411769
| | ||||| |||||||| ||||||| || || || || | || ||||| | | |
Sbjct 5162 AC-TTTTGGTACTCGCTGCCCAGCACAAACTCCAGCCGGTCGACCGACACGCCCACGGCC 5104
Query 2411770 TGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGCTCGACGAGGTCCCAC 2411829
| || | | | || |||||| ||| | | ||||| | |||||| ||
Sbjct 5103 TTCAGGCTCTCTGTTATCACAAACTTGTAGTACTTGGCGCGGTGGTTGACGAGCTCAATT 5044
Query 2411830 GGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACAT 2411889
|||| |||| || |||||| ||||| | |||||||| | ||| | || ||||
Sbjct 5043 GGCGCCTTGAGGTTATCGAGGAACGCGTGGATGTCGGCAAGCAAGATTTTGACGTGACAG 4984
Query 2411890 CCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCC-CAGATGGGGCTT 2411948
|| ||||| || || | || | || | || |||||||||||||| ||| |||| |
Sbjct 4983 CCCGCCTGCAGGAACTGCGCAATCTTCAGCATCGGCACAAAGTAGCCGCAGTGCGGGCGT 4924
Query 2411949 GCCCGTCGGCGCGGTGCCCCAATA 2411972
||||||| ||| |||||||| ||
Sbjct 4923 -CCCGTCGTCGCTGTGCCCCAGTA 4901
>seq546
Length=57559
Score = 147 bits (162), Expect = 3e-29
Identities = 278/410 (68%), Gaps = 14/410 (3%)
Strand=Plus/Plus
Query 2071610 TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGG 2071669
||||||| ||||||| ||||||||| | ||||| || ||||||| ||||| |||
Sbjct 43320 TGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGG 43379
Query 2071670 GCGCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAA--TTTGGCGCGCGGGCAC 2071727
| || |||||| |||| ||| || |||||| |||| | ||| | |||||| |
Sbjct 43380 GATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTTTGGGCGCGGACT- 43438
Query 2071728 CGAGGTCCTCGCG----CGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGG 2071783
||| ||||| ||||| | |||| | || || ||
Sbjct 43439 ----GTC-TCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTAGAGCTCCTCGAACTCGT 43493
Query 2071784 CGCCGTGGCAC-TCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCG 2071842
|||||| ||| ||| || || || |||||| ||||||||||| | ||| || |||
Sbjct 43494 CGCCGTA-CACGTCGGCAAGACCCGGGGCCTCGTGAGGGCAAAAGAGAGTCCATTCACCG 43552
Query 2071843 CCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGC 2071902
| |||| || ||| ||||| ||| |||||| |||||||||| ||||||
Sbjct 43553 TTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCGTAAAAGAGGTCGCGC 43612
Query 2071903 GCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCG 2071962
|| ||| ||||||||| ||||||||||| |||||||| || || || ||| |||
Sbjct 43613 GCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCG 43672
Query 2071963 TGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
||||| |||||||||||| |||||| || || |||||| ||| ||
Sbjct 43673 TGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTGTTGCCACC 43722
Score = 113 bits (124), Expect = 7e-19
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|||||||| ||||| || |||| ||| |||| ||||||||||| | |||||||||||
Sbjct 43724 TGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGGCCGTTGGAG 43783
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
||||||||||| || | ||||| ||| | || || | ||| || | ||
Sbjct 43784 GTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGGTGGACGTTGAGACCA 43843
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || ||||||| |||||| || | || || | || || || ||||| || ||||||
Sbjct 43844 ATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAATACCCTCG 43903
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755
|| ||| |||||||||| | || ||||| ||
Sbjct 43904 ATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGA 43938
>seq642
Length=60501
Score = 104 bits (114), Expect = 4e-16
Identities = 92/115 (80%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| || |||||||| || |||||| | || || || | || ||||||||||||||||||
Sbjct 13405 GCTGCGAACTACCTGGATATCAAGGCTCTGCTGGACGTCGGTTGCAAGACCGTGGCCAAC 13464
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||||||||||||||| || || ||||| ||||| || ||||| || |||
Sbjct 13465 ATGATCAAGGGCAAGTCGCCGGACGAAATCCGGAAGACTTTCAACATTCAGAACG 13519
>seq852
Length=55362
Score = 91.5 bits (100), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| |||||||||||| ||||||| || ||| |||
Sbjct 49723 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGCAG 49782
Query 1485531 GATCAGGCGCACG 1485543
||||| || |||
Sbjct 49783 GATCAACCGAACG 49795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916103751713699
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |