Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq923 91.5 1e-13
>seq923
Length=2568
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || || || || || || ||||| || |||| | || |
Sbjct 317 ACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCC 258
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| || ||||| || | ||||| | ||||| || ||||| || ||||| ||
Sbjct 257 ATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTT 198
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | ||||| | || | || || ||| ||| || || || || |
Sbjct 197 GTCCTG-AATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGA 139
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || | ||| || || || ||||||||
Sbjct 138 TCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385212904194081
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |